Castor canadensis (American beaver): 109689669
Help
Entry
109689669 CDS
T04791
Symbol
Usp13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
ccan
Castor canadensis (American beaver)
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccan01002
]
109689669 (Usp13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccan04121
]
109689669 (Usp13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccan04147
]
109689669 (Usp13)
Enzymes [BR:
ccan01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
109689669 (Usp13)
Peptidases and inhibitors [BR:
ccan01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
109689669 (Usp13)
Ubiquitin system [BR:
ccan04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
109689669 (Usp13)
Exosome [BR:
ccan04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109689669 (Usp13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_4
UBA_3
HYPK_UBA
Motif
Other DBs
NCBI-GeneID:
109689669
NCBI-ProteinID:
XP_020024206
UniProt:
A0A250Y5P2
LinkDB
All DBs
Position
Unknown
AA seq
863 aa
AA seq
DB search
MQRRGALFSMPGGSGSRKMAAGDIGELLVPHMPTIRVPRSGDRVYKSECAFSYDSPNSEG
GLYVCMNTFLAFGREHVERHFRKTGQSVYMHLKRHMREKVRGASGGALPKRRNSKIFLDL
DTDDDLNSDDYEYEDEAKLVIFPDHYEIALPNIEELPALVTIACDAVLSSKSPYRKQDPD
TWENELPVSKYANNLTQLDNGVRIPPSGWKCARCDLRENLWLNLTDGSILCGKWFFDSSG
GNGHALEHYRDMGYPLAVKLGTITPDGADVYSFQEEEPVLDPHLAKHLAHFGIDMLHMHG
TENGLRDNDIKPRVSEWEVIQESGTKLKPMYGPGYTGLKNLGNSCYLSSVMQAIFSIPEF
QRAYVGNLPRIFDYSPLDPTQDFNTQMTKLGHGLLSGQYSKPPVKSELIEQVMKEEHKPQ
QNGISPRMFKAFVSKSHPEFSSNRQQDAQEFFLHLVNLVERNRIGSENPSDVFRFLVEER
IQCCQTRKVRYTERVDYLMQLPVAMEAATNKDELIAYELTRREAEANRRPLPELVRAKIP
FSACLQAFSEPENVDDFWSSALQAKSAGVKTSRFASFPEYLVVQIKKFTFGLDWVPKKFD
VSIDMPDLLDINHLRARGLQPGEEELPDISPPIVIPDDSKDRLMNQLIDPSDIDESSVMQ
LAEMGFPLEACRKAVYFTGNMGAEVAFNWIIVHMEEPDFAEPLTMPGYGGAASSGASVFG
ATGLDNQPPEEIVAIITSMGFQRNQAVQALRATNNNLERALDWIFSHPEFEEDSDFVIEM
ENNANANIISEAKPEGPRVKDGSGMYELFAFISHMGTSTMSGHYVCHIKKEGRWVIYNDH
KVCASERPPKDLGYMYFYRRIPS
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgccggggcgccctgttcagcatgccgggcggcagcggcagcaggaagatggct
gcaggagacatcggcgaactgctggtgccccacatgcccacgatccgcgtgcccaggtcc
ggggacagggtctacaagagcgagtgcgccttctcctacgactcccccaactcggaaggt
ggactctatgtatgcatgaatacatttttggcctttggaagggaacatgttgaaagacat
tttcgaaaaactggacagagtgtgtacatgcacctgaaaagacatatgcgagagaaagta
agaggggcatctggtggagctttaccaaaaaggaggaattccaagatttttttagatcta
gatactgatgatgatttaaatagcgacgattatgaatatgaagatgaagccaaacttgtt
atattcccagaccactatgagatagcactaccaaatattgaggagttaccagccctggta
acaattgcttgtgatgcagttctcagctcaaaatccccatacagaaaacaggatccagac
acatgggaaaatgaattgccagtgtctaaatatgccaacaacctcacccaactggataat
ggagtcaggattcctcccagtggttggaaatgtgccaggtgtgacctgagggagaacctc
tggttgaatctgactgatggctctatcctgtgtgggaagtggttctttgacagctccggt
ggcaacgggcatgctctagagcattacagagacatgggctaccctctggctgtgaagctg
ggaaccatcactcctgatggggcagatgtttattcttttcaagaagaggaacctgttctg
gaccctcatctggcgaagcatttagcgcattttggaattgatatgcttcacatgcatggg
acagagaatgggctccgggacaatgacatcaagccgagggttagtgagtgggaagtgatc
caggagtcggggacgaagctaaagcctatgtatggccctgggtacacaggcctgaagaac
ctgggcaacagctgctatctcagttctgtcatgcaggccattttcagcatcccagagttc
cagagagcgtatgtaggaaaccttccaagaatatttgactactcgcctttagatccaaca
caagatttcaacacacagatgactaagttaggacatggccttctttcaggccagtattca
aagcctccggtgaaatctgagctcattgagcaggtgatgaaggaggagcacaagcctcag
cagaatgggatctctccacgtatgtttaaggcctttgtcagcaagagccacccggaattc
tcctccaacagacagcaagatgctcaggagtttttcttgcatttggtgaatctcgtagag
aggaaccgcattggctcagaaaacccaagtgacgtttttcgatttttggtggaagagcgt
attcaatgctgtcagactcgaaaagtccgatatacagagagggtggattacctgatgcag
ttacctgtggccatggaggcagcaaccaacaaagatgagctgattgcctatgaattaacg
agaagggaagcagaagccaaccgaagacctcttcctgagttggtgcgtgccaagatacca
tttagtgcttgccttcaggccttttctgaaccagaaaacgttgacgatttctggagcagc
gccctccaagccaagtctgcgggtgtgaaaacatctcgatttgcctcattccctgaatac
ttggtagtgcaaataaagaagttcacttttggtcttgactgggttcccaaaaaatttgat
gtgtctattgatatgccagacctacttgatatcaaccatcttcgagccaggggattacag
ccgggagaggaggaacttccagacatcagtccccccatcgtcattcctgatgactcaaaa
gatcgtctgatgaaccaattgatagacccctcagacattgatgagtcgtcagtgatgcag
ctggccgagatgggcttccctctagaagcatgtcggaaggccgtgtactttactggaaac
atgggagctgaggtagccttcaactggatcattgttcacatggaagagccagattttgct
gaaccactgaccatgcctggttatggaggagcagcatcttctggagcctctgtatttggt
gctactggattggataaccaacctccagaggaaattgtagctattatcacctccatggga
ttccagcgaaatcaagctgtgcaagcattacgagcaacgaataataacctggaaagagca
ctggattggatctttagccaccctgagtttgaagaggacagtgactttgtgattgagatg
gagaataacgccaatgcaaacatcatttctgaggccaagcctgaaggacctagagtaaag
gatggatctggaatgtatgaattatttgcatttatcagtcacatgggaacatctacaatg
agtggccattatgtttgccatatcaaaaaggaaggaagatgggtgatctacaatgaccac
aaggtttgtgcctcagaaaggcctcctaaagacctgggctacatgtatttttaccgcagg
ataccaagctaa
DBGET
integrated database retrieval system