Castor canadensis (American beaver): 109689992
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Entry
109689992 CDS
T04791
Symbol
Thoc1
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan03013
Nucleocytoplasmic transport
ccan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109689992 (Thoc1)
09122 Translation
03013 Nucleocytoplasmic transport
109689992 (Thoc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccan03019
]
109689992 (Thoc1)
03041 Spliceosome [BR:
ccan03041
]
109689992 (Thoc1)
Messenger RNA biogenesis [BR:
ccan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
109689992 (Thoc1)
Spliceosome [BR:
ccan03041
]
Complex C
Other components
EJC/TREX
109689992 (Thoc1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
109689992 (Thoc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
HsdM_N
Motif
Other DBs
NCBI-GeneID:
109689992
NCBI-ProteinID:
XP_020024670
UniProt:
A0A8C0ZVF9
LinkDB
All DBs
Position
Unknown
AA seq
657 aa
AA seq
DB search
MSPTPPLFSLPEARTRFTKSTREALNNKNIKPLLNTFSQLPGSENEKKCTLDQAFRGVLE
EEIINHSSCENVLAIISLAIGGVTEGICTASTPFVLLGDVLDCLPLDQCDTIFTFVEKNV
ATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
FNLENVTVFNTNEQESTLGQKHTEDREEGMDVEEGEMGDDEAPTTCSIPIDYNLYRKFWS
LQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKTGGEHVYFAK
FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSV
YQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERTSDTKPTRVVRKRTAPE
DFLGKGPNKKILMGNEELTRLWNLCPDNMEACKSETREYMPTLEEFFEEAIEQADPENMV
ENEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEI
KTGEDEDEEDNDALLKENESPDVRRDKPVTGEQIEVFANKLGEQWKILAPYLEMKDSEIR
QIECDSEDMKMRAKQLLVAWQDQEGVHATPDNLISALNKSGLSDLAESLTNDNETNS
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgacgccgccgctcttcagtttgcccgaagcgcggacgcggtttacgaaatct
accagagaggccttgaacaacaaaaatatcaagccgttgttgaataccttcagccagtta
cctggcagtgaaaatgaaaaaaaatgcactcttgaccaagctttcagaggtgttctagaa
gaagaaattataaatcattcatcatgtgaaaatgttttagctattatttctcttgctatt
gggggagtaactgaaggtatttgtactgcatctacaccttttgtattgttgggagatgtt
ttggattgtcttcctttggatcagtgtgacacaatattcacttttgtggaaaaaaatgtt
gctacttggaaatcaaatacattctattctgctgggaaaaattatttacttcgtatgtgc
aatgatctcctaagaagattatctaaatcccagaatacagtcttctgtggacgaattcaa
ctctttttggccaggctttttcctctctctgagaaatcaggtcttaacttgcaaagtcaa
ttcaacctggaaaatgtcactgtcttcaataccaatgagcaggaaagcaccctgggtcag
aagcacactgaggatagagaagaagggatggatgtagaagaaggtgaaatgggagatgat
gaagctccaacaacttgctccattccaatcgattataacctgtatagaaaattctggtca
cttcaggattacttcaggaatccagtgcaatgctatgagaagatttcatggaaaactttt
cttaagtattctgaggaagttctagctgtttttaagagttataaattagatgatactcag
gcctccaggaaaaaaatggaagagttgaaaacgggaggagaacatgtatattttgcaaaa
tttttaacaagcgaaaagttgatggatttgcaactgagtgacagtaactttcgccgacat
atcctgttgcagtatctcattttattccagtatctcaagggacaggtcaaattcaaaagt
tcaaactatgttttaactgatgagcagtcactctggattgaagatactacaaagtcagtc
tatcaactactatctgaaaatccccccgatggagaaagattttcaaagatggtagagcat
atattaaacactgaagaaaattggaactcatggaaaaatgaaggctgtccaagttttgtg
aaagaaagaacatcagataccaagcctacaagagtggtacggaagagaacagccccagag
gacttcctaggcaagggaccaaacaagaaaattctgatgggaaatgaggagttaacaaga
ctttggaatctgtgtcctgataacatggaagcctgtaaatcagagacaagggaatacatg
ccaactttggaggagttctttgaagaagccattgaacaagcagaccctgaaaatatggtt
gaaaatgaatataaagctgtgaataattcaaattatggttggagagccttgagactatta
gcacgaagaagccctcacttcttccagccaaccaaccaacagttcaaaagtttgccagag
tatctcgaaaacatggtaataaagctagccaaggaattaccacctccttctgaagaaata
aaaacaggtgaggatgaagatgaggaagataatgatgctttactgaaggaaaatgaaagt
cctgatgttcggcgggataaacctgtaacaggggaacagatagaggtatttgccaacaag
ctgggtgaacaatggaagattctggctccctacttggaaatgaaagactccgaaattagg
cagattgagtgtgatagtgaagatatgaagatgagagctaagcagctcctagttgcctgg
caagatcaagaaggagtccatgcaacacctgataatctgattagcgcactaaacaagtct
ggattaagtgaccttgcagaaagtttaactaatgacaatgagacaaatagttag
DBGET
integrated database retrieval system
