Castor canadensis (American beaver): 109697575 Help Entry 109697575         CDS       T04791                                  Symbol Lig1 Name (RefSeq) DNA ligase 1   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism ccan  Castor canadensis (American beaver) Pathway ccan03030   DNA replication ccan03410   Base excision repair ccan03420   Nucleotide excision repair ccan03430   Mismatch repair Brite KEGG Orthology (KO) [BR:ccan00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     109697575 (Lig1)    03410 Base excision repair     109697575 (Lig1)    03420 Nucleotide excision repair     109697575 (Lig1)    03430 Mismatch repair     109697575 (Lig1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:ccan03032]     109697575 (Lig1)    03400 DNA repair and recombination proteins [BR:ccan03400]     109697575 (Lig1) Enzymes [BR:ccan01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      109697575 (Lig1)     6.5.1.6  DNA ligase (ATP or NAD+)      109697575 (Lig1)     6.5.1.7  DNA ligase (ATP, ADP or GTP)      109697575 (Lig1) DNA replication proteins [BR:ccan03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     109697575 (Lig1)  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      109697575 (Lig1) DNA repair and recombination proteins [BR:ccan03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      109697575 (Lig1)    NER (nucleotide excision repair)     Other NER factors      109697575 (Lig1)    MMR (mismatch excision repair)     Other MMR factors      109697575 (Lig1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C DDR Motif Other DBs NCBI-GeneID:  109697575 NCBI-ProteinID:  XP_020036856 UniProt:  A0A8B7VY49 LinkDB All DBs Position Unknown AA seq 917 aa AA seqDB search MQRSIMSFFQPTKDSKVKKVEKEITNNGKEMEPPPKVALKERNGVVPESDSPVKRPGRKA VRVLSSEGEEEDEALSDPKGQKPMSDSPQASPASPATCPENSPFLSNIPMDISQSGIPKR RTARKQVPKGTIQDHLEEESEDKDRKAKKRKQEEEAKTPQEGPTEAKVAKMKEKEERDQL MTPPEPPKPPKTDTLIKTESIPMPDTAGKQERQEEEQSKPPPKGPWTVSSFFTPRKPAVK AKVKEESGILKKEEAKGTQDPTSYNPAKNNYHPIEDACWKPGQKVPFLAVARTFEKIEEV SARLRMVETLSNLLRSVVALSPPDLLPVLYLSLNRLGPPQQGLELGVGDGVLLKAVAQAT GRQLESIRAEAAEKGDVGLVAENSRSTQRLMLPPPPLSTSGVFNKFRDIARLTGSASTAK KIDIIKGLFVACRHSEARYIARSLSGRLRLGLAEQSVLAALAQAVSLTPPGQEFPPAMVD AGKGKTAEVRKTWLEEQSMALKQTFCEVPDLDRIVPLLLEHGLEQLPKHCRLSPGVPLKP MLAHPTRGVSEVLKRFEEAAFTCEYKYDGQRAQIHVLEGGEVKIFSRNQEDNTGKYPDII SRIPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDASEIQVQVCLYAFDL IYLNGESLVRKPLSRRRQLLRENFVETEGEFAFATSLDTKDTEQIAEFLEQSVKDSCEGL MVKTLDIDATYEIAKRSHNWLKLKKDYLEGVGDTLDLVVIGAYLGRGKRAGRYGGFLLAA YDEDSEELQAICKLGTGFSDEELEAHHQSLQALVLPTPRPYVRVDGAVAPDHWLDPSAVW EVKCADLSLSPIYPAARGLVDSEKGISLRFPRFIRVREDKKPEQATTSAQVACLYRKQSQ IQNQQGAGSDSDPEDFY NT seq 2754 nt NT seq  +upstreamnt  +downstreamnt atgcagcggagtatcatgtcatttttccaacctacaaaggacagtaaagtgaagaaggtt gagaaggagatcaccaacaatggcaaagagatggaaccccctccaaaggtggcactgaag gagcggaatggagtggtgcctgagagtgactctccagtgaagaggccagggaggaaggca gtgcgggtcctgagcagtgaaggagaggaggaagatgaagccctcagtgaccccaaaggc cagaagcctatgtcagactccccacaggcctctcctgctagccctgccacatgtccagag aacagcccttttctctccaacatccccatggacatttcccaatcaggaatcccgaagcgt cgcacagctcggaagcaggtccccaaagggacaattcaggaccacctggaagaggagagt gaggacaaggacagaaaagccaagaagaggaagcaggaggaagaagcaaagaccccacaa gaaggccccacagaggctaaagtagcaaaaatgaaggaaaaagaagagagggatcagctt atgacacctcctgagcccccaaagcctcccaaaacagacaccctaataaagacagaaagc attcccatgcctgacacagctgggaagcaagaacggcaggaagaggagcagagcaagcct ccccccaaaggtccctggactgtcagcagcttcttcaccccccggaagccggcggtcaaa gctaaagtgaaagaagagtcaggaattctgaagaaggaggaagccaagggaacccaggac ccgacgagctacaatcctgccaagaacaactaccatcccattgaagacgcctgctggaaa ccaggccagaaggtcccttttctggcagtggcccggacatttgagaagattgaggaggtt tctgctcggctccgtatggtggagacactgagcaacttgctgcgctctgtggtagctttg tcacctccagacctgctcccggtcctctacctcagcctcaatcgccttgggcctccccag caaggcctggagttgggtgttggtgatggcgtcctcctcaaggcagtggcccaggccaca ggtcggcagctggagtccatccgggctgaggcagctgagaagggtgatgtggggctggtg gccgagaacagccgtagcacccagagactcatgctgccaccaccccctctttccacctct ggggtcttcaacaaattccgtgacatcgcccggctcactggtagcgcttccacagccaag aagatagacatcatcaaaggcctcttcgttgcctgccgccactcagaagccaggtacatc gcaaggtccctgagtgggcggctgcgccttgggctggctgagcaatcagtgctggctgcc cttgcccaggctgtgagtcttacacctccaggacaagagtttcccccagccatggtggat gctggaaagggcaagacagcagaggtcagaaagacgtggctagaggagcagagcatggcc ctgaagcagacgttctgtgaggtacctgacctagaccgcatcgtccctctgctgctggaa cacggcctggagcagctccccaaacactgcaggctgagtccaggggtccccctgaaacct atgttggcccatcccactcggggtgtcagcgaggtcctgaagcgctttgaggaggcagcc ttcacctgcgagtacaaatacgatgggcagagggcccagatccatgttctggaaggcggg gaggtgaagatctttagcaggaatcaggaagataacacaggaaagtatcctgatatcatc agccgcatccccaagattaaactcccttcagtcacatccttcatcctagacactgaagct gtggcttgggaccgggaaaaaaagcagattcagccattccaagtgctcaccactcgcaaa cgaaaggaggtggatgcgtcggagatccaggtgcaggtgtgtctgtatgccttcgaccta atctacctcaatggagagtccctggtccggaagcccctgtcgcgacggcggcagctgctt cgagaaaactttgtggaaaccgagggcgaatttgccttcgccacctctttggacaccaag gacacagagcagatcgccgagttcttggagcagtctgtgaaagactcctgcgaggggcta atggtgaagaccctggacatcgatgccacctatgagatcgccaagaggtcacacaattgg ctcaagctgaaaaaggactacctcgaaggtgtgggtgacactctggacctcgtggtgatt ggtgcctacctgggccgagggaagcgcgctggccggtatgggggcttcctgctggctgcc tacgatgaagacagtgaggagctgcaggccatatgcaagcttggaactggctttagtgat gaggagctggaggcacatcaccagagtctccaggccctggtactgcccactccacgcccc tatgtgcgggtagatggtgctgtggcccccgaccactggctggaccccagtgctgtatgg gaggtgaagtgtgccgacctctccctctcccccatctatcccgctgcccggggcctggtg gacagtgagaaagggatctctcttcgcttccctcggttcattcgagtccgtgaagacaag aagccagaacaggctaccaccagtgcccaggtggcctgtctgtaccggaagcaaagtcag atccagaaccagcaaggcgcaggctcagactctgaccctgaagatttctactaa

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