Cyprinus carpio (common carp): 109045015
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Entry
109045015 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: toll-like receptor 8
KO
K10170
toll-like receptor 8
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
109045015
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ccar04054
]
109045015
04090 CD molecules [BR:
ccar04090
]
109045015
Pattern recognition receptors [BR:
ccar04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
109045015
CD molecules [BR:
ccar04090
]
Proteins
109045015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
TIR
TIR_2
LRR_6
LRR_12
LRR_9
LRRNT
Motif
Other DBs
NCBI-GeneID:
109045015
NCBI-ProteinID:
XP_018918448
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All DBs
Position
40:21163713..21168544
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AA seq
973 aa
AA seq
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MVIKLDLWLIMTLTLCQMDTVSLKIQPCDIYDNVTTMTVVVDCHGRGLKMVPKFLPNTTD
LDISENKIENVTAENFQDLANLTNLNLNWLNKKXKVLVGTGVFSNMTKLRKLELNGIGLK
DVPKDIPKNLQELTLIENKITRLNSTSFRHVQNLSLIYLSRNCYYWNPCSSYYHIEDGSF
SVLTKLKNLTLSFNNLTQVPKGLPFSLMKLELASNRISYIGKHDFRGLNNLISLNIQGNC
PRCYTAPFPCIPCKNVSIEIHPRAFAGLGKLRILDLAGNSIRKINPTWFANISKLEELYL
SYNYLFSAVQDKIFLNNLPLLTKLDLSFNYALKIYPTTVTISPSFANLTSLRTLHLRGLV
FQEIQEETFSSLFGLRNLSVLDVGINFIIHAKAEIFEKFQHVKLIYLSENRLYPELRKDA
GVGLKSSFMMPSMSEPYPKGNSFSLPKDLVKPECSATGRVLDLSRNNLFLITPEQFQPYG
NISCLNLSGNGFATAPNGSEFTSLPDLKYLDLSFNRIDLAYDYAFRELQSLEVLDLSDNS
HYFTVEGVTLNLNFLKYLPSLKVLNMSYNSIYTLTTKTMSSKSLQELQFQHNKLGKMWRL
KDGTYDRLFEDLTNVTYLDISHNDIRNIPLEIYKYLPKSIQKLGLSKNRLRSVNWDMLRQ
FTHLRELILSHNYILKISSNLSSDVPSLVFLDLWHNKISELSSGFLQGAVNLERLDLSHN
QIITINQSTFPAETEFYLKTLWLNNNPFHCTCNLFEFVLWIRKTKVKIPKLVTGVTCAMP
EEREGKAVIEFDITECNDDQLAFLAYFFSTFCIICSTFVAVAMHLFYWDISYLFYYLKAR
FTGYQQLSSDSCIYDAFITYDTKDTQVSDWVLNHLRVQLEEQGERFLPICLEERDWIPGS
PVLDSLTQSIQHSRKTVFVLTERYVNSGSFKLAVFLAHQRLLEDNEDVIVLLLLEPVLQH
SHFLKQSKTVVDG
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggtgataaaattagacctctggctcattatgacactaaccctgtgtcaaatggacaca
gtgagtctgaagattcaaccctgtgatatatatgacaatgtaaccacaatgacggttgtg
gttgactgccatggacgtggactcaaaatggtgccaaagttcttaccaaatacaactgat
cttgatatatctgagaacaagattgagaacgttacagcagaaaacttccaagacctggca
aatctgaccaatctaaatctgaactggctgaataaaaagnataaggttcttgttggcacc
ggggtgttttcgaatatgaccaagctacgtaaactggagctcaacgggatcggactaaag
gacgtaccaaaagatattccaaagaatctgcaagaactaacgctgattgagaacaagatc
acccggttaaactcaacatccttcaggcatgtgcaaaatctgtcactcatttacctttcg
agaaactgctactactggaatccttgctcaagttattatcatatagaagacggaagtttt
tctgtcctgaccaagttgaaaaaccttactttgtcttttaacaacttaactcaagtcccc
aaaggcttaccgttctcattgatgaaacttgagcttgcttcaaacagaatatcgtacatc
ggaaagcatgatttccgaggactcaacaatctgataagtctaaatatccaagggaactgt
ccacggtgttatactgctccatttccatgcattccatgtaaaaatgtttccattgaaatt
catccacgagcctttgctggcctcggaaagctgcggattctggaccttgctggaaattca
atcaggaaaatcaatcctacttggttcgcaaacatctcaaagcttgaggaactctacctg
tcgtataattacttgttcagtgctgttcaagataagattttcttgaataatctgccactg
ctgacaaaactcgatctctcgtttaactacgctctcaagatttaccccaccacggttaca
atatcacccagctttgcaaacttaacgtcgctgaggacgctgcaccttcgtggtttggtt
tttcaagaaatccaagaagagaccttcagctctctatttggtttacgaaatctgtcggtg
ttggatgtaggaataaacttcattatccatgcaaaagcggaaatatttgaaaaatttcaa
catgtgaaactaatctatctttcggaaaacagactttacccggagttgcgtaaagatgca
ggcgttggtttaaaatcttcattcatgatgccctcgatgtcagaaccttatcctaaaggg
aattctttcagccttccaaaagatcttgtaaaaccagagtgctctgccaccgggcgcgtg
ttagatctcagccgaaataacctgttcttaattactcctgaacagtttcagccatacggg
aatatatcttgcctcaatctctcaggaaatggctttgccacagctccgaatggatctgaa
ttcacatcgctcccagacctcaaatatctggacttgtccttcaacagaattgacctggca
tacgattacgctttccgagagttacagagtctcgaggtgctagatcttagtgacaactcc
cattacttcactgtggaaggtgtgaccctcaatttgaactttctcaaatatttgccctcc
ttgaaagtgttaaatatgagctacaacagcatctataccttaaccaccaaaaccatgtca
agcaagtctcttcaagagctgcaattccagcacaataaactcggcaagatgtggaggttg
aaagacggaacctacgataggctattcgaagacttgaccaatgtgacctatcttgacata
tcccataatgacattaggaacatccctttagagatttataaatatcttcccaaaagcatt
caaaagttgggattaagcaaaaatagactgagaagcgttaattgggacatgttgagacaa
ttcactcatctacgagagctcattttaagtcacaactacatcctaaaaatatctagtaac
ttgtcaagcgacgttccttctttagtgttccttgatctgtggcacaacaaaatatccgag
ctttccagtggattccttcagggagcggtaaacctagagaggcttgatctcagtcacaac
cagatcataacaatcaaccagtccacgtttccagctgaaactgagttttacctaaagacg
ctgtggctcaacaacaaccctttccactgcacatgcaacctgttcgaatttgttctgtgg
attcgcaagactaaagtgaagatccccaaattggtgactggtgtgacatgtgccatgcct
gaggagagggaaggtaaagcagtgatagaatttgatattacagaatgcaacgatgaccag
ttggcgtttctggcgtacttcttctccactttttgcattatatgcagcacatttgtggct
gtcgcaatgcaccttttctactgggacatttcctacttgttctactatttgaaagccaga
tttactgggtatcagcaactgagctctgacagctgcatctatgacgccttcatcacctac
gacaccaaggacacacaggtgtctgactgggtgctcaatcacctgcgagtgcagctggag
gagcaaggcgagcgattcctgcccatatgcctggaggaacgggactggattcccggttct
cccgttctggacagtctgacgcagagcatccagcacagccgcaaaaccgtcttcgtcctg
accgagcgctacgtgaacagtggctcctttaagctggccgtgttcctggcgcaccagagg
cttctggaggataacgaggacgtgatcgtgctgctgctgctggagcccgtgttgcagcac
tcgcactttctaaaacaatcgaagactgttgtagacgggtaa
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