Cyprinus carpio (common carp): 109071456
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Entry
109071456 CDS
T05134
Symbol
rnps1
Name
(RefSeq) RNA-binding protein with serine-rich domain 1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03013
Nucleocytoplasmic transport
ccar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109071456 (rnps1)
03015 mRNA surveillance pathway
109071456 (rnps1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccar03019
]
109071456 (rnps1)
Messenger RNA biogenesis [BR:
ccar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
109071456 (rnps1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HTH_32
HTH_29
RRM_3
Nup35_RRM_2
RRM_occluded
HTH_23
Sigma70_r4_2
RRM_5
KdpD
Motif
Other DBs
NCBI-GeneID:
109071456
NCBI-ProteinID:
XP_018943445
LinkDB
All DBs
Position
Unknown
AA seq
244 aa
AA seq
DB search
MIDGIVYKKIAKTLKLSCNTVAQTIQRFNRTGSTQNRPRHDRPKRLSARAQRHIQMLCLG
NRRMSAASIAAEVEEMGDDHCLAKEAEGEGDGLDPFEHLWGILKRKVEERKEHIQEIFST
YGKIKMIDMPPDRLHPNLSKGYAYVEYESPEDAQKALKHMDGGQIDGQEITATAVLAQRI
RPVPRRPSPPRRMPPPPPMWRRTPPRMRRRSRSPRRRSPVRRRSRSRSPGRRRHRSRSSS
NSSR
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacggcatagtctataagaagattgccaagaccctgaaactgagctgcaacacg
gtggcccagaccatacagcggtttaacaggacaggttccactcagaacaggcctcgccat
gatcgaccaaagaggttgagtgcacgtgctcagcgtcatatccagatgttgtgtttggga
aatagacgtatgagtgctgccagcattgctgcagaggttgaagagatgggggatgaccac
tgccttgctaaagaagctgagggtgaaggtgatggactggacccttttgagcatctgtgg
ggcatcctcaaacggaaggtggaggagcgcaaggaacatattcaagagatcttttcgact
tacggcaagatcaagatgattgacatgcctccggaccgtttgcacccgaatctgtcaaag
ggttacgcttatgtggaatacgagtctccagaggacgcccagaaagccctgaaacacatg
gacggaggtcagatcgacggtcaggaaatcacagccacagctgtcctggcccagaggata
cgacctgtgccgagaagaccgtcacctccgcgccggatgcctccgccgccgcccatgtgg
cgccgcacgccgcctcgcatgaggagaaggtctcggtctccgcggcgccgctcaccggtg
agaagacgttcccgctccaggtctccgggtcgcaggagacatcgttcccgctccagttcc
aactcgtcccgttag
DBGET
integrated database retrieval system
