Cyprinus carpio (common carp): 109081848
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Entry
109081848 CDS
T05134
Name
(RefSeq) SWI/SNF complex subunit SMARCC1-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109081848
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccar03021
]
109081848
03036 Chromosome and associated proteins [BR:
ccar03036
]
109081848
Transcription machinery [BR:
ccar03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109081848
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109081848
PBAF complex
109081848
GBAF(ncBAF) complex
109081848
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
SWIRM-assoc_3
Myb_DNA-bind_6
DUF919
Motif
Other DBs
NCBI-GeneID:
109081848
NCBI-ProteinID:
XP_018952351
UniProt:
A0A9Q9Z6Y8
LinkDB
All DBs
Position
Unknown
AA seq
973 aa
AA seq
DB search
MATQAQGSAAAGPTTSQAGCSASLSRRMDGGPCCKFWESPEIISQLETVRSWIGKHYKKY
VQTDAPSSKSLAGLVIQLLQFQEDSFGRRANNPSFTKLPAKCFQDLRPGGALCHILGSVY
KFKTEQGWRRFDLQNPSRVDRNVEMFISVEKTLIQNNLLSRPVVYLSPDLEQKQALKLKE
IVVRHQGTVIEEKSQATHQIYTSPSTADEEEWLRPVMRLDRQVMVHWGMCPDSYDSLISA
RDVDGEVEEPPNPDRCWKVHTKWVLDTDTYNEWMNEEDYEIDENGNRMSFRRRIYQSTEE
QKPGKKRRRSPSPPSSESKKKGGKKSSGVYKKRGQPEEAEPEEDLTKDMEDPTPVPNMEE
VILPKNVNLKKDSENTPVKGGIMADLDDQEEDLLSGVRDEEEQREFGRGMEGEESATEQT
HHIIVPTYASWFDYNCIHQIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYL
TSTSCRRNLTGDVCSLIRVHSFLEQWGLINYQVDAESRPLPMGPPPTPHFNVLTDAPSGL
VPLQHRPLQVSASQHMLHFPEKLREKPSDLQNFGLRSDIYAKKHPKSKGASAGREWTEQE
TLLLLEALEMYKDDWNKVSEHVGSRTQDDCILHFLRLPIEDPYLENSEASMGPLAYQPVP
FSQSENPVMSTVAFLASVVDPRVASAAARAALEEFSRAREEAPPEIFSASFHRAQRIGHN
LDPAFTLQTGSIAELDPDHSEKTDGSGLETMSTEYEQHEKLEGDSILEEGERVKNEEKEE
SEGERGEESTAEESFDMCLTQGDGEEMKRRVELELVEGNIATAAAAALASAATKAKHLAA
VEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLSERQNFHLEQ
VKYAEMKARQNVEQQQQAGATQSSSSTAYNPLHHGRSVGSASTGQIVGARHSGAPNGMYQ
SPPSSQADGATPM
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggctacacaagcacaaggatctgctgctgcgggacctacgacgagtcaagccggttgc
agcgcttcgttgagccgaagaatggacggtggaccgtgctgtaaattctgggaaagcccg
gaaataatctctcagttggaaacggttcgcagttggattggaaaacattataaaaagtat
gtacagactgatgctccctccagcaagtctctggctgggctggtcatccaactcctgcag
tttcaggaagattcctttgggcggcgagcaaataacccaagctttacaaaactcccagcg
aagtgttttcaggacctaaggccaggcggtgcactctgtcatattctgggatcagtgtac
aagttcaagacagaacagggctggagacgctttgatcttcagaacccatccagagtggat
cgcaatgtggagatgttcatctctgtggagaaaactctgatacagaataacttattaagc
agacctgtggtgtacctgtctcctgatcttgaacagaagcaagctcttaaactcaaagag
attgttgtgcgacaccagggcacagtgatagaggagaagtcacaagccacccaccaaata
tatacatcaccctccacagcagatgaagaagagtggcttagaccagtcatgcgattggat
cgccaagtgatggtacactggggcatgtgtccagacagttatgactcacttatatcagca
agggatgtagatggagaagtagaggaacctcccaacccagacaggtgctggaaggttcat
accaaatgggttctcgacacagacacatataatgagtggatgaacgaggaagactatgag
attgatgaaaatggtaatagaatgagtttcaggcggcgtatctaccaaagcacagaggaa
cagaaacctggaaagaagcgacgacgctccccgtctccaccatcctctgagtctaagaag
aaaggaggaaagaaaagctcaggtgtgtataagaagcgtggtcaaccagaggaggcggag
ccagaggaggacctcactaaagacatggaggatcccacacctgtccctaacatggaggag
gtcattctgcctaaaaatgtgaacttgaaaaaagacagtgaaaacactccagtcaaagga
ggcattatggctgatttggatgaccaggaagaggacctgctttcaggtgtcagagatgag
gaggaacagagggagttcggccgtgggatggagggggaggagagtgccacagagcaaaca
catcacatcattgtgcccacctatgcctcctggttcgactacaattgtattcatcagata
gagagacgagctctgcctgagttcttcaatgggaaaaataagtccaaaacaccagaaata
tatcttgcgtaccgcaacttcatgattgatacataccggctaaaccctcaggagtatctg
acctcaacctcctgtagacgaaacctgacaggagatgtgtgttcactaataagagttcat
tcatttttggagcagtgggggttgatcaactatcaggtagatgcagaaagccgacccctc
cccatgggcccaccccctacaccacactttaacgttctcacagatgcaccatccggactc
gtcccactacagcacagacccttacaggtttcagcttctcagcatatgttgcatttccca
gagaaattgagagaaaaaccatctgacctgcagaactttggtctacggagtgacatttat
gctaagaaacatccaaagagtaaaggcgcaagtgcagggagagaatggacagaacaggaa
acactcttgcttttggaggcattggagatgtataaggatgactggaataaggtgtcagag
catgtgggcagtcgcacacaggatgattgtattcttcacttcttacggttgcctatagag
gacccatacctagagaactctgaagcctcaatgggtcctctggcctatcagcctgtcccc
ttcagccagtcagagaaccctgtaatgagcactgtggctttccttgcatctgtggtcgac
cctcgagtggcctctgcagccgccagggcagctttagaggaattctcaagagcaagagaa
gaggccccaccagagatattcagtgccagctttcacagagcacagagaattgggcataat
ttagatccggcctttacactccaaactggcagcattgcagaacttgatcctgaccattca
gaaaagactgatgggagtggcctagaaacaatgagcactgaatatgagcaacatgaaaag
cttgagggtgatagcatcttggaagagggagagcgtgtgaagaatgaggagaaagaagag
agtgaaggagagagaggagaggagagcacagcagaggagagttttgacatgtgccttacc
caaggggatggagaggagatgaagaggagggtggagcttgagctggtggaggggaacatc
gccacagctgctgctgcagcactggcctctgcagctaccaaagcaaagcacttggctgca
gtagaagagaggaaaatcaaatctctggtggctctgctggttgagactcagatgaaaaag
ttggagatcaaactgagacactttgaagagctggagaccattatggatcgcgaaaaagag
gctctggagcagcagagacagcagttactgtcggaaaggcagaacttccacctggagcag
gtgaaatatgctgagatgaaggcacgacaaaatgtggaacagcagcaacaagcgggagcc
acacagagcagcagtagtacagcatacaaccctcttcaccatggtcgttcggtgggcagt
gctagtactggacagatcgtgggtgctcggcactctggagctcccaatggcatgtaccaa
agtccaccatcctcacaggctgatggggccacacccatgtaa
DBGET
integrated database retrieval system
