Cyprinus carpio (common carp): 109105239
Help
Entry
109105239 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: VPS10 domain-containing receptor SorCS1-like
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109105239
Membrane trafficking [BR:
ccar04131
]
Protein recycling
Others
Others
109105239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
BNR_6
Motif
Other DBs
NCBI-GeneID:
109105239
NCBI-ProteinID:
XP_018974138
LinkDB
All DBs
Position
31:3819415..3892089
Genome browser
AA seq
922 aa
AA seq
DB search
MYTAVGVHLTGAGNSKATYNTSHMYRRAHHPSANVYCSAVILMLTKLYDFNLGSVTESSL
WRSTDYGTTYEKLNEKVGVKTILSYLYVSPNNKRKIMLLTDPEVESSLLISSDEGATYQK
YRLNFYILSLLFHPEQEDWILAYGHDQKLYSSVEFGRRWQLVHERVAPNRFYWSKLGLDK
EPGLIHLETSISETQALYVTCKLQNCTDANKGKPFPGYIDPNSLVVQDEYVFVQVSTGGR
PIYYVSSRRDVFTPMKLPKYTLPKVAGIKGMFLANKKLNNEVKTYITYNKGRDWRLLQAP
SADLRGNRIHCMLPYCSLHLHLHVSANPYTSGNIASRELAPGIIVASGSIGAELTSSNVS
MFITSDAGNTWRQIFDEEYSVLYLDQGGALVAIRHTPLPIRHLRLSFDEGRLHIHDENLP
FYLTERRRLLRIFGHVSHRSEWQLVKIDFRSIFNRRCIESDYVPWDLHDQGERCLMGVKR
VYRKLKPIARCVMGKTYSVTTISEPCDCTESDFECDYGFERRADGKCTPAFWFLPSSMSR
TCTTEHTFLNSTGYRKVVSNNCTGGVMEQYTARRQLCPSQAPRGLHLVTSEGKLTATLAS
NVTFLVFLEEGDGSKTSITVDFGDGNAFTYSNVSSIEDGIKHIYKNVGIYRVSATAENSL
GTETVLLFLHITCQLESIHLSAPFVAVKXKEVNLTVVLSPSQVGTVTYIWWFGNNSEPVI
TLEGSVAFTFSREGISVVTVQVSAGNNILQDRKTIAVHEYFRSHLLAFSSNLDDHNPDVA
EWRLDVSRVIKNSMVQATGVNSDQLLVTVLPGLPTVAEFFLLPDKQLTEGKPEKTATHLD
QLSELVLSALNQNLVQFTLRPGVQVTVYAAHLSAAPLVDTSENHSGSAMLMLLSVVVVGL
AVFLIYKFKRYCYPFLKLQPGS
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgtacactgcggtaggagttcatctgacaggagctggcaacagcaaggccacttacaac
acttcccatatgtacagaagggcccaccatccttcagctaatgtttactgctctgctgtg
attctcatgctgaccaaactatatgacttcaatctgggcagtgtcacagaaagctcctta
tggaggtcaacagattacggaaccacttacgagaaactcaatgaaaaggtgggagtaaag
accatcctcagctatctgtacgtcagccccaacaacaagcgcaagatcatgttgctgaca
gatccagaggtggagagcagtttgctcatcagctcagatgaaggcgcaacctatcaaaaa
tatcgcctcaacttctacatcctcagcctgttgtttcaccctgagcaggaggactggatc
cttgcctatggccatgaccagaagctctacagctctgttgagtttggccgtcgatggcag
ctcgttcatgagcgggtggcgcccaatcgattctactggtctaaactgggccttgataaa
gagccgggcctgattcaccttgagaccagcatctcagaaacccaggctctttatgtcaca
tgcaagcttcagaactgcacagatgccaacaaaggcaaaccttttcctggatacatcgac
cccaactccctggtggtccaagatgagtatgtgtttgtccaggtgtcaactggtggccgg
ccaatctactacgtgtcatccaggcgagatgtgtttacacccatgaagcttcccaaatac
acccttccaaaggtggcaggaataaaaggcatgttcttggccaataagaagctaaataat
gaggtgaagacatacataacctataacaaaggccgcgactggaggctcctgcaggctccc
tcagctgatctcagaggaaaccgaatccattgcatgctgccatactgttctctgcatctt
cacctgcacgtatctgcaaacccatacacatctggaaatatagccagcagagagttggcc
cctggaatcatagtggcatcaggttcaattggcgcagagttaacgagcagcaatgttagc
atgttcatcacatccgacgctggaaacacgtggcggcagatatttgatgaagagtacagt
gtgctgtatctggatcaaggcggagctttagtggcaattagacacacccctcttcccatc
aggcacctcaggttgagctttgatgaggggaggctgcacatccatgatgagaatctcccg
ttctacctaaccgaacgtcgtcgtctacttaggatcttcggtcatgtcagtcaccgctca
gaatggcagctggtaaagatagacttcaggtctatctttaacagaagatgcatcgagtct
gactatgtgccgtgggatttacatgaccagggtgaacgctgcctcatgggagtcaaaaga
gtctaccgaaagctgaagcccatagcgaggtgcgttatgggtaaaacctactctgtcaca
acgatttccgagccatgtgactgcactgagtcggactttgagtgtgattatggctttgag
agaagggctgatgggaaatgtactccggcattctggttcctcccctcctccatgtctcgg
acctgtactacagaacacacgttcctcaacagcactgggtacagaaaggtggtgtctaat
aactgcaccggtggggtgatggagcagtacacggctcgtaggcagctatgccctagccag
gcccctcgcggcctccacttagtgactagtgaagggaagctaacagcgactcttgccagc
aacgtcaccttccttgtcttcctggaggagggtgatggatcgaaaaccagcataacggtg
gatttcggcgacggaaacgctttcacctactccaacgtgagctctatcgaggatgggatt
aaacacatctacaagaacgtggggatctaccgagtgtcagccacggcggagaacagtctg
ggcactgaaacggtgctcctgtttctacacattacatgtcaactggagtctattcatctc
tccgctccttttgtagctgtgaaanataaagaagtcaatctgacggtggttctctcacca
agccaagtgggaacggtcacctatatctggtggtttgggaacaattcggagcccgtgatc
acgctggaggggagtgtggcgttcacgttctctcgagagggaatcagtgttgtcaccgta
caggtgtccgctgggaataacatcctgcaagacaggaaaaccatcgctgtccacgaatac
ttcagatctcatcttcttgccttttcatctaatctggatgatcacaaccctgatgtggct
gaatggaggctggatgtgagtcgagtcattaaaaactctatggtgcaggcgacaggagtg
aattcagaccagctgttggtcactgtgttgcctggactgccaacagtggccgagttcttt
ctgttaccagacaaacagctgacagaagggaaaccagaaaaaacagctacccatttagac
cagctctcagaactggttctcagtgctctgaatcagaatctggttcagttcacactcaga
ccaggagtccaggtcacagtatacgctgcccatttatcagcagcgcctctagtggacaca
agcgagaatcacagtggctcagctatgctcatgctcctttctgtggtggtggtgggttta
gctgtgttcctcatctataaattcaaaaggtattgctatccatttttaaaactccaacct
ggatcataa
DBGET
integrated database retrieval system
