Cyprinus carpio (common carp): 109107394
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Entry
109107394 CDS
T05134
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccar04121
]
109107394
Ubiquitin system [BR:
ccar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
109107394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-C3HC4_2
zf-B_box
zf-C3HC4
zf-C3HC4_3
zf-RING_2
zf-RING_5
U-box
Sina_RING
zf-RING_10
DUF6468
Mce4_CUP1
DUF1043
DUF1664
Motif
Other DBs
NCBI-GeneID:
109107394
NCBI-ProteinID:
XP_018976222
LinkDB
All DBs
Position
33:23660120..23796411
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AA seq
544 aa
AA seq
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MAEARICQDEFMCPVCLDLLKDPVTIQCGHSYCKSCIEGSWDQEDQTRVYSCPQCRETFS
PRPALARNTMLAELVEKLKKTKLSADCDAGAGDVQCDVCTGRKYKAVKSCLMCQESYCQT
HFDRHEAFHSRKPHKVIEATGRLQEMICQKHEKHLEMYCITDQQCICELCTKYEHKNHDT
VSAAAQRTEKQKQLKETQKTLQQRIQQREKDLQQLRETVESHKRSVQTAVEDSERIFTEL
IRSIERSRSELIRLIRDQEKTAVSRAEGQLERLEQEINDLRRRDAELEQLSHTQDHIQFL
QSFQSLSAPPESTDVNDDLFSSLFSSDALRESVHQLRDKLEDFCKEELKKISDRVTFTNI
VPRTRNDFLQYSRQLTLDLNTVNKLLRLSENNRVITATRRVQSYPDHPDRFDVYVQVLCR
ESMCERCYWEQEWSGDNGVRITVSLKSISRKGSSNECSFGCNDQSWSLYCSHSSYSFIHN
NIWTNLPVKSISSRIGVFVDHSAGTLSFYSVSDTMSLIHTVQTTFTQPLYPGFGVYKGSS
VKLC
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagccagaatttgtcaggatgagttcatgtgtccagtgtgtctggatctcctg
aaggatccagtgaccatccagtgtggacacagttactgtaagagctgtattgaaggcagc
tgggatcaggaggatcagacaagagtctacagctgccctcagtgcagagagaccttcagt
ccaagacctgctttagctagaaacaccatgctggctgaactggtggagaaactgaagaag
accaaactttctgctgactgtgacgctggagctggagatgtgcagtgtgacgtctgtact
ggaagaaaatacaaagctgtcaagtcatgtctgatgtgtcaggaatcttactgtcaaact
cattttgaccgccatgaggcatttcattcacgtaaaccacacaaagtgattgaagccact
ggacgactgcaggagatgatctgccagaaacatgagaaacatctggaaatgtactgtatt
actgaccaacaatgcatttgtgagctgtgtacaaaatatgaacataaaaaccatgacact
gtatcagccgcagcccagaggacagagaaacagaagcagctgaaggagacgcagaagacg
ctccagcagagaatccagcagagagagaaagatcttcagcagctgagagagactgtggag
tctcataagcgctctgtacagacagcagtggaggacagtgagaggatctttactgagctc
atccgctccattgagagaagccgctctgagctgatacgactgatcagagatcaggaaaag
actgcagtgagtcgagctgaaggacagctggagcgactggagcaggagatcaatgatctg
aggaggagagacgctgagctggagcagctttcacacacacaggatcacatccagttcctg
cagagtttccagtctctctcagcacctcctgaatctacagacgtaaatgatgatctcttc
agctctctcttctcttctgatgctctgagagaatctgtccatcagctgagagacaaactg
gaggatttctgcaaagaggagctcaagaagatctcagacagagtcacattcaccaacatt
gttcccagaaccaggaacgacttcttacaatattcccgtcagctcactctggatctgaac
acagtgaataaactcctccgtctgtctgagaacaacagagtgattactgccactagaaga
gtacagtcgtatcctgatcatccagacagatttgatgtgtatgttcaggtgttgtgtaga
gagagtatgtgtgaacgctgttactgggagcaggagtggagtggagataatggtgttcgt
ataacagtgtcattaaagagcatcagcaggaagggatcaagtaatgagtgttcgtttgga
tgtaatgatcagtcctggagtttgtactgctctcattccagttactcattcatacacaat
aacatatggactaatctccctgtaaagtccatcagcagtagaataggagtgtttgtggat
cacagtgcaggaactctgtccttctacagcgtctctgacacaatgagcctcatccacaca
gtccagaccacattcactcagccgctctatcctgggtttggtgtttataaaggatcatca
gtgaaactgtgttga
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integrated database retrieval system
