Cyprinus carpio (common carp): 109110213
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Entry
109110213 CDS
T05134
Name
(RefSeq) RNA binding protein fox-1 homolog 3-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccar03041
]
109110213
Spliceosome [BR:
ccar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
109110213
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
109110213
NCBI-ProteinID:
XP_018978799
UniProt:
A0A9Q9XKG2
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All DBs
Position
36:complement(16092826..16130221)
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AA seq
321 aa
AA seq
DB search
MAQTYTPQFAHPPQNGIHAEFTALPTQDYAGQNRVPDHGLTLYTPAQTHSDLVNADSNTP
AISSSSNTAPTEDVTQTEVSQQVPHSESTEKQQPKRLHVSNIPFRFRDPDLRQMFGQFGK
ILDVEIIFNERGSKGFGFVTFETSADADRAREKLNGTIVEGRKIEVNNATARVMTNKKVI
NPYTNSWKLNPVVGAVYGPELYAVTGFPYPAAGATVAYRGAHLRGRGRAIYNTFRTAPPP
PPIPAYGTMVYQDGFYGAEIYGGYAAYRYTQPATATAYSDSYGRVYATTDPYHHTIAPAA
TYSVGTMASMYRGGYSRFTPY
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggcccagacttacactccgcagtttgctcatcccccgcagaacggcatccacgccgag
ttcaccgcgcttcccacgcaagactacgcaggacagaaccgcgtcccggatcacggcctg
acgctctacacgccggcacagacccacagcgatctggtcaacgccgacagcaacacgcca
gccatcagcagcagcagcaacacagcaccgacggaagacgtgacgcaaacagaagtttcc
cagcaggtgccgcattcagagtccacggaaaaacagcagcccaaacgattacacgtgtcc
aacatccccttccgcttccgtgacccggatttacggcaaatgtttgggcaatttgggaag
atcttagacgtggagattatctttaatgaaagaggatcaaagggctttggctttgtaact
tttgaaacgagcgcagacgcagatcgtgcgcgggagaaactaaacggtacaatcgtagaa
ggacgtaaaatcgaggtgaacaatgccacagcgagagtgatgacgaataagaaagtgata
aacccgtacacaaacagctggaaactcaatccggtggtaggagctgtttacggaccggag
ctctatgcagtgacgggtttcccgtatcccgcagcaggagcgacggtggcgtacagaggc
gctcatctgcggggcagaggccgtgccatttacaacaccttccgcacggctcctcctcct
ccacccatccctgcgtacggcacgatggtgtatcaggacggattctacggtgcggagatc
tatggtggatatgcggcgtacagatatactcagcctgcaacagctacagcgtacagcgac
agttatgggagagtctatgcaactactgacccatatcaccacaccatcgccccggcagcc
acctacagcgtggggaccatggcgagcatgtacagaggaggctacagccgcttcacaccc
tactag
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