Ceratitis capitata (Mediterranean fruit fly): 101458440
Help
Entry
101458440 CDS
T07533
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
ccat
Ceratitis capitata (Mediterranean fruit fly)
Pathway
ccat03022
Basal transcription factors
ccat03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccat00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101458440
09124 Replication and repair
03420 Nucleotide excision repair
101458440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccat03021
]
101458440
03400 DNA repair and recombination proteins [BR:
ccat03400
]
101458440
Transcription machinery [BR:
ccat03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
101458440
DNA repair and recombination proteins [BR:
ccat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
101458440
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
101458440
NCBI-ProteinID:
XP_004522236
LinkDB
All DBs
Position
Unknown
AA seq
491 aa
AA seq
DB search
MSDAKAGRSGPTTSTYALIPKPANLQCMDLQEYLRTRTPETLEKLYNYPTICLAVYRELP
EIARQFVIRILFVEQPVPQAVVASWGSQHYAKEQAASASCLTELNVWRVTAIPGGLSAWE
LCSTFKKNLKIALLGGGKPWSMSHTLEKDSKPRDIAFLDTYAMARWRCVLHYMVGTGSSN
KTQDSEGISPDAVRILLHANLMKRDERDGITITRQGFQFLLLDTQSQVWHFMLQYLDTCE
ERGLSLPDCLSMLFQLSFSTLGRDYSSEGMSAKMLTFLQHLREFGLVFQRKRKEGRFYPT
RLALNVTNKHATVPAIINEEDKVQESGYIVVETNYRVYAYTDSPLQVAVLGLFTELLYRF
PNLVVGVLTRDSVRQALRGGITAEQIVSYLEQYAHPNMKLTESAIKSKSPLPPTVVDQIK
LWELERNRFIYTEGVVYNQFLSQADFVTLRDYAQSINVLVHMNERTRTMVVTKNGHDDVK
RFWKRYSKGGG
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatgccaaagctggtcgttctggacccacaacatctacttatgcgctaattcca
aaaccagccaatttgcaatgtatggatctgcaagaatatctacggacaagaacgccagaa
acattggagaaattgtataattatccaactatttgtttggctgtctatagagaattgcct
gaaattgcacgccaattcgtaatacgtatactttttgtagagcaaccagtacctcaagcg
gtggtcgcgtcatggggctcgcaacactatgccaaagaacaagctgcttccgcctcatgt
ctaacagaactcaacgtatggcgcgttactgccatacctggcggcttatcagcttgggag
ctttgctcaacatttaaaaagaacttaaaaatagctttactaggtggtggtaaaccatgg
tccatgtctcatacgttggaaaaagattcgaaaccacgagatatcgcttttcttgataca
tatgctatggctcggtggcgatgcgtattgcactacatggtaggcactggaagctcaaat
aaaacacaagatagtgaaggtattagtccagatgcagtgcgcattttactgcatgctaat
ctcatgaaacgtgacgaacgcgacgggattactataacacggcaaggatttcagtttcta
ctgctcgacacacaatcacaggtatggcatttcatgctacagtatctggacacctgcgaa
gaacgtggtctgtcgttacccgattgcctctcaatgttgttccaactgagtttttccacc
ttgggacgggactatagctccgaaggcatgagtgcaaaaatgttgacatttttacaacac
ttacgtgaatttgggctcgtatttcaacgtaaacgtaaagaaggccgtttttatcccact
cggttggcgttgaacgttacaaacaagcatgccaccgtgccagccattattaatgaagaa
gataaggtccaggagagtggttatattgtggtggaaacaaattaccgtgtatacgcctac
acagactcgccgctgcaggttgcagtgttgggtttatttaccgaattactataccgtttt
cctaacttagtggtcggtgtactaacacgagactctgtgcgtcaagctctacgaggtggc
ataactgcagaacaaatagtaagctatttagaacaatatgcgcatccgaatatgaaattg
actgagtcggcaatcaaatcaaaatcaccactacctccaactgtcgtcgatcaaattaaa
ctttgggaactagagcgtaatcgttttatctacactgagggtgtggtctacaatcaattc
ttgtcacaagctgactttgtgacgctacgtgattatgcacaatctatcaatgtgctggta
cacatgaacgaacgtacgcgtactatggtcgtgactaaaaatgggcatgatgatgtgaaa
cgattctggaaacgctactcaaagggtggtggttaa
DBGET
integrated database retrieval system
