Ceratitis capitata (Mediterranean fruit fly): 101463323
Help
Entry
101463323 CDS
T07533
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
ccat
Ceratitis capitata (Mediterranean fruit fly)
Pathway
ccat03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ccat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
101463323
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccat03400
]
101463323
Enzymes [BR:
ccat01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
101463323
DNA repair and recombination proteins [BR:
ccat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
101463323
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
RNA_ligase
DNA_ligase_A_C
BRCT_2
BRCT
Motif
Other DBs
NCBI-GeneID:
101463323
NCBI-ProteinID:
XP_012162319
LinkDB
All DBs
Position
Unknown
AA seq
920 aa
AA seq
DB search
MDISKNIKFADICSMLDKVKNSKNQESKEKVIRRYYDSFQKFRQIFREKQGLAANCPDDG
ETSFYSVLRCLIPREDLSRKPYGLQISTLSSVYIEVLQLAKDSSEAQRLEARTYNGTSGD
YADIVHAVLMPQCKNDPSELSLYEVHQMLDNIAEGDRQATKKVLTRLSEVASAKEQMWFI
RLLLKNMHLGIGEQRIFAIMHSQARDLNRRCSNLKRVCCLVANNKMNDESTITEKNVTKS
FTNTFNLNTVVQPFQHIQAMLCEMFSGNIEQLMAEDVLYLETKMDGERFQLHYANNRFKY
ISRNGIDYTHSFGEDYKNGKLTPLLQTLLPTNLQSIILDGEMMVYDTQLKCYRDKGENTD
VKHLNNRTHWRPCFVVYDVLYFNGNSFLEMPYAQRCQKVLELIRSEEPGILEIMRPIKLS
TTNQFQELFQQALDAKAEGVVLKKQNSIYKPGIRKGGGWYKIKADYIDGLTTEFDLLVIG
GFYNRTRTFIQSFLLGVLKYTSETHYELYSVGKVDNKSRQRTVLNNALKPYWHDCKQEPP
PQWYHYKSSRADGRPDVWIEPNKSVILQIKATDLTPNASFFLPKSLHFPRVEMWRNDKAW
NECLSLHDYMEMIQMERGIKKIHKRSVELSDLTLPQKRRKLTAAERRKLGILSYERRFNP
DEVEQHSNLFEGFSFCILSASLKNGYTPEALKAMVVSNGGEIVENPIQDSKCISVAGDMT
FRVETLCKSRRYNIAKLSWLVNTCRKQELQLTPIDMVCTTNELETEFSHIFDRYGDPYAE
CTDVEHLITVLEGITAEDIAAAQPSSDEITDLELLFCDESIDLFMNCKGFFYSLDKQSQL
AKLIFKYFGGKCHEIVDEKSLNSIEYIFINVNLVDKVKLKAWIRENFKNHLGKLEVVNIA
WITHSERAKGNWMNASICVE
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggatatatcaaaaaatataaaatttgccgatatttgttcaatgctagataaagtaaaa
aattctaaaaaccaagaatctaaggaaaaagtaatacgccgctattatgactcatttcaa
aagtttcgacaaatatttcgcgaaaaacaaggattggctgcaaattgtcctgatgatggt
gaaaccagtttctatagtgttctaagatgtttaataccccgagaggatttatcacggaag
ccttatggactccaaatatcaactctcagtagtgtctatattgaagttctacaactagcg
aaagattcgagtgaggcccagcgactagaggcacgcacatataatggaacatctggtgac
tatgcagatattgtacatgcagttctgatgcctcaatgtaagaatgatcccagtgaacta
tcgctgtatgaagtacatcagatgttagataatatagcagaaggcgatcgacaagctaca
aaaaaggtgctcacacgtctctcagaagtagcctcagctaaggaacaaatgtggttcatt
cgtttgctattaaaaaacatgcatttgggtattggagagcaacgcatttttgcgatcatg
cattcccaagcgagggatctaaataggcggtgctcgaatctaaaacgtgtatgctgttta
gtggctaataacaaaatgaacgacgaatccacaataactgaaaaaaatgttacaaaatcc
tttactaatactttcaacttaaatactgtcgtacaaccctttcaacacatacaagccatg
ttatgtgaaatgttttctggtaacatagagcaattaatggctgaagatgttctttaccta
gaaacgaaaatggatggcgaacgttttcagctgcattatgccaataaccgatttaagtat
atttcgcgcaatggtattgattatacgcatagttttggtgaggattataaaaacgggaag
ctaactcctttactgcaaacgctattaccaactaacttgcaatcaataattctcgatggt
gagatgatggtttacgacactcaacttaaatgctaccgcgacaagggtgaaaatacagat
gtgaagcatctgaataacagaacgcattggagaccttgttttgtggtatatgatgtactt
tatttcaatggtaatagttttctggaaatgccttatgcacagagatgccaaaaagtgcta
gagcttattagatcagaggagccagggattttggaaataatgcgaccaataaaactgtca
accaccaatcaattccaagagctctttcagcaggcgctggacgccaaagcagaaggtgtg
gttttaaagaaacaaaactctatatacaagcctggcatacgcaaaggtggtggctggtac
aagataaaagcagattacatagatggtttgactaccgaattcgatttactggttattgga
ggtttttataaccgaacgcggacattcatacaatcatttttgctaggtgtactcaagtac
acctctgagacacattacgaactttatagtgtgggaaaagttgacaataagtcgcgacag
cgtacggtactgaataatgcgcttaaaccttattggcacgattgtaagcaggagccccca
ccacaatggtatcattataaatcatcacgtgctgatggccgacctgatgtgtggattgaa
ccaaacaaatctgttatactgcaaatcaaagctaccgatctaacgcctaatgcatctttt
tttctaccgaaatcattgcattttccacgcgtagaaatgtggcgcaatgacaaagcatgg
aatgagtgtctctcgctgcatgattacatggaaatgatacagatggaaagaggaataaaa
aaaattcataagcgcagtgttgaattaagcgatttgacattaccacagaaaagacgcaag
ttaactgcagccgagcgtcgaaaattggggattttgtcatatgaacgtcgttttaatcca
gacgaggtagaacagcattcgaatttatttgagggattctcattttgtatattgagtgcc
agcttgaaaaatggctatacacctgaagcattgaaagctatggtggttagcaatggtggc
gagatagttgagaatcctatacaagattccaaatgtatatcagtggcgggtgatatgact
tttcgagtggaaaccttgtgcaaatcccgtcgttataacattgcgaaattgagttggttg
gtgaatacctgtcgaaaacaggaattacagttaacacccatcgatatggtttgtacaacg
aatgaactagaaactgagttttcgcatatatttgatagatacggcgatccatatgcagaa
tgtacagatgttgagcatttaataacagtgctagaaggcataactgctgaagatattgct
gccgcacaaccatcttcagacgaaataaccgatcttgaattactattctgtgatgagtca
atcgatttatttatgaactgtaaaggtttcttttacagtttggataagcagtcacagctt
gcgaaattaatttttaaatattttggtggtaaatgtcatgaaattgtggatgagaaaagt
ttaaatagtattgagtacatattcatcaatgtaaatttagttgataaagttaaacttaag
gcgtggattcgtgaaaattttaaaaatcatttgggaaaattagaggtcgtaaacattgca
tggataacacattctgaacgagcaaaaggaaactggatgaatgcgagtatatgtgtggaa
taa
DBGET
integrated database retrieval system
