Cynara cardunculus var. scolymus (artichoke): 112500402
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Entry
112500402 CDS
T05604
Name
(RefSeq) ABC transporter B family member 15-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112500402
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccav02000
]
112500402
04147 Exosome [BR:
ccav04147
]
112500402
04090 CD molecules [BR:
ccav04090
]
112500402
Enzymes [BR:
ccav01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
112500402
Transporters [BR:
ccav02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
112500402
Exosome [BR:
ccav04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112500402
CD molecules [BR:
ccav04090
]
Proteins
112500402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
ABC_ATPase
AAA_16
AAA_22
AAA_30
AAA_29
RsgA_GTPase
AAA_28
AAA_21
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
112500402
NCBI-ProteinID:
XP_024959664
LinkDB
All DBs
Position
LG 17:complement(920881..930300)
Genome browser
AA seq
868 aa
AA seq
DB search
MSNESTETKRKVKNGSFRSIFMHADGVDMFLMTLGFLGAVGDGFSVPLMLLVMSKMMNNI
GSSASLSMDVFIDKMNKNAAILCYMAIGICVACFLEGYCWARTAERQASKLRSTYLKAVL
RQEVAYFDLNTTSTSDIVTSVSSDSLLIQEVISEKVPVLVMNVAVFGGAYFVGFILLWRL
AVVALPFILILVTPGLICGRVLMSLSRKIREEYNKAGSVAEQAISSVRTVYSFVGENKAI
TEFSAALEGTLKMGLKQGLAKGVTIGSNGLAFCVWSFMAWYGSRLVMYHGARGGTVFAVS
SVVALGGLSLGSGLSNVKFISDAMAASERIKEVIERVPAIDSDDMAGETLQQVSGEVEFK
NVKFAYPSRPESLIFKDFNLKIPAGRTVALVGGSGSGKSTVIALLQRFYNPHGGEICMDG
KRIDKLQLKWLRSQMGLVSQEPALFATTIKENILFGKEDAAMDEVIEAAKASNAHNFISQ
LPLAYDTQVGERGVQMSGGQKQRIAIARAIIKSPHILLLDEATSALDSESERVVQEALDQ
ASVGRTTIVVAHRLTTIRNADVIAVVNNGQVVESGSHNELIQLENGFYTSLVRLQETKPH
DEPTNHFPLGPSSAFDVHNTSSRRHSIVSRSSSINSVNHGENPNLANEEFPVPSIKRLLA
MNAPEWKEALFGSVGAVLFGAVQPVYRDIKSYHLRTLRKYFALVSQEPTLFAGTIHENII
YGASEEVSESEIIEAAKAANAHDFIAVLKDGYDTWCGDRGVQLSGGQKQRIAIARAILKN
PAILLLDEATSALDSQSEKVVQDALERMLVGRTSVVVAHRLSTIQSCDTIAVLEKGKVVE
KGNHGSLLAKGPTGAYYALVRVQKPNSG
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacgagagcacagagaccaaacggaaggtcaaaaatggatcattccgatccatt
ttcatgcatgccgatggtgtcgacatgtttctgatgactcttgggtttttaggtgccgtt
ggcgatggattttcggtgccgttgatgttgcttgtgatgagcaaaatgatgaacaatatc
gggagctctgcttctctatcgatggacgttttcatcgacaaaatgaacaagaatgcagca
attctttgttacatggcgattggaatatgtgtagcatgttttcttgaggggtactgttgg
gcaagaacagcagaaaggcaggcatcaaagttgagatcaacatatctgaaagcagtttta
cggcaagaagtggcgtatttcgacttgaacactacaagcacgagcgacatcgtcaccagt
gtttcgagtgatagccttctcattcaagaagtcattagcgaaaaggtcccggtgctcgtg
atgaacgtggccgtttttggcggggcatattttgtgggatttatattactatggaggcta
gcagttgttgcgcttccattcatcctcattttagttacgccgggtctgatttgtggaagg
gttctgatgagcttatcaagaaagataagggaggagtataacaaggccggttcggtggcg
gagcaggcgatttcttcggtgaggacggtttattcatttgtcggtgaaaataaagcgata
acggaattttccgctgctctggaaggaactttgaagatgggtttaaagcaaggtttggcg
aaaggagtgacgatcgggagcaacggtcttgcattttgcgtgtggtcgttcatggcatgg
tatggtagtcgattggtgatgtaccatggagctagaggaggaactgtgtttgcggtttca
tccgtcgttgccttgggtggactatcattgggttctggattatccaacgtcaaattcatt
tccgacgccatggccgccagcgaacgcataaaagaagtgatcgaaagagttccggcgata
gattccgacgacatggcaggggagacattacaacaagtctccggtgaagtggaattcaag
aacgtaaagtttgcttacccatcgaggccggaatctttgattttcaaagacttcaacttg
aaaattccggcagggaggacggtggcgctggtgggcgggagtggttccggcaaatcgacg
gtgattgcattgttgcagaggttttataatcctcacggaggagagatttgtatggatggt
aagagaatcgataagcttcaactaaaatggttgagatcgcaaatgggtttggtgagtcag
gagcctgctttgtttgcgaccaccataaaagagaatatactttttggtaaagaagatgcc
gccatggatgaagtgattgaagctgcaaaagcttcaaatgctcataatttcatctctcaa
ttgcctctggcttatgacacacaggttggagaaagaggggttcaaatgtcaggtgggcaa
aaacaaagaattgcaattgctcgtgcaataatcaagtcacctcatatccttctcttggac
gaggcaacgagtgcactcgactcggaatcggaacgagtcgttcaggaggcactcgatcaa
gcctccgttggtcggaccaccatcgtcgtagctcatcgtctcaccacaatacgaaacgcc
gacgtaatagccgtcgtcaacaacggtcaggtggtcgagtcgggctctcacaacgaactc
atccaactcgaaaacgggttctacacatccctcgtccgcctccaagaaaccaaaccacac
gacgaacccaccaaccatttcccactcggaccatcatcggcattcgacgtccacaacacg
agcagccgtcgacactcgatagtcagccgctcgagctctataaactcggtcaaccacggt
gaaaacccgaacttggccaacgaagaatttccggtaccgtccattaagcggcttttagcg
atgaacgctcctgaatggaaggaagcgttgtttgggagtgtaggagctgttctatttggt
gcagttcagccggtttatagagatataaagtcgtaccatttaagaactctaaggaaatac
ttcgcactagtgagccaagaaccgacattattcgctggtactatacacgaaaacatcatc
tacggggcatcagaggaagtttcggaatcggagatcatcgaagctgcaaaagcagccaat
gctcatgatttcatagcggttttgaaagacgggtacgatacatggtgcggagatcgaggg
gtccaactctccggaggacaaaagcaacgcattgctatagctcgtgccatactgaaaaac
cccgcaattctgttactagacgaggccacgagcgcgttggatagtcagtcggagaaagtg
gttcaagacgcactggagcggatgttggtggggcggacgagcgtggtggtggcgcaccgg
ctgagtacgatccaaagttgcgatacgattgcggttttggagaaagggaaggtggtggag
aaagggaaccatggttcgttgctagcgaaaggaccgactggggcttactacgccttggtt
cgggttcagaagcctaattcaggctaa
DBGET
integrated database retrieval system
