Cynara cardunculus var. scolymus (artichoke): 112502726
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Entry
112502726 CDS
T05604
Name
(RefSeq) uncharacterized protein LOC112502726
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
112502726
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccav03400
]
112502726
Enzymes [BR:
ccav01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
112502726
DNA repair and recombination proteins [BR:
ccav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
112502726
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Mito_fiss_reg
VIR_N
Motif
Other DBs
NCBI-GeneID:
112502726
NCBI-ProteinID:
XP_024962484
LinkDB
All DBs
Position
Unknown
AA seq
399 aa
AA seq
DB search
MCSSKSKLIQPIQVNSKATPAATMVSDINGRPVLQPATSNRVLARCSHKKSPSLPKSAST
PPPPPPPPLHANQPEYCTNSSSERLFPSTPIKCTAQKSVIPVKKLKGVTSNNGGGHDHRS
SDFISAAVISTNPNSLVKYSSAAIVDAPGSIAAVRRVQVAAIQVQRKMRIAHYGRSKSAK
YDSCSKLTSYFDFNSLMNATTGFREEKRCSFITPTSDPIYVGYHDEEWGVPVHDDKLLFE
LLVLTGAQVGSDWTSVLRRRQKFREAFSEFEAEIVSKFTDKKITSISSCYGIEVGLIRGV
VDNSNCILQIKKAFGSFDKYIWGFLNHKPIVTQYKLNQKMPVKSSKSEAISKDMVRRGFR
QVSPTVIHSFMQAAGLTNDHLITCPRHLQCGRHPPFSDH
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgtgttcttcaaaatccaaattgatacaaccaattcaggtaaactctaaagctactccg
gcagccaccatggtttccgacatcaatgggcggccggtgctccaaccagctacctccaac
cgagtccttgcaagatgttcgcataaaaagagtccatccctccctaaatcagcttccaca
cctccaccaccaccaccaccaccacttcacgctaaccagcccgagtactgtacgaattcc
agctctgaaaggctctttccgtcaacacccatcaaatgcaccgcccaaaaatctgttatt
ccggtaaaaaagttaaaaggagttactagcaataatggcggtggccatgatcaccgttcc
agcgattttatttctgctgccgtcatcagcactaatcctaactcattggtgaagtactca
tcagcggcgattgtggatgctccggggagtatagcggctgtaaggagggtacaggtggca
gcgattcaggttcagaggaaaatgaggattgctcactatggtagatctaagtctgccaag
tatgatagctgcagcaagctcacatcttactttgatttcaactctctgatgaatgccact
actggtttcagagaagagaaaagatgcagcttcatcactcctacttcagaccctatatat
gttggataccatgatgaagaatggggagttcctgttcatgatgataagttgctgtttgaa
ttgttggtgttgacaggtgctcaagttggatcagattggacttcagtcttgagaagaaga
caaaaatttagggaagcattctcagaatttgaagcagaaattgtatccaagtttacagat
aagaagataacatcaattagtagttgttatgggattgaagttggccttatcagaggtgtt
gttgacaactctaattgtatccttcagatcaagaaagcattcgggtcgtttgacaagtat
atatggggatttttgaatcacaagccgattgtaacgcaatacaaactgaatcaaaagatg
cctgtaaaaagctctaaatcggaagccataagcaaagacatggtgaggaggggattccgg
caggtcagtcctactgtcatccattcgttcatgcaagctgccggactcaccaacgatcac
ctcatcacttgcccccgccacctccaatgcggccgccatccaccattctccgatcattaa
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