Cynara cardunculus var. scolymus (artichoke): 112503071
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Entry
112503071 CDS
T05604
Name
(RefSeq) protein transport protein SEC23-like
KO
K14006
protein transport protein SEC23
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112503071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112503071
Membrane trafficking [BR:
ccav04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
112503071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
VWA_2
zinc_ribbon_10
VWA_3
VWA
Motif
Other DBs
NCBI-GeneID:
112503071
NCBI-ProteinID:
XP_024962904
LinkDB
All DBs
Position
Unknown
AA seq
793 aa
AA seq
DB search
MDFVELEAIEGLRWSWNSWPVSKTESNNLVIPLSIMQTPLMKFNELPLLSYDPLICSRCG
SVLNPYARVDYPSRIWVCPFCYQKNSFPRSYAEIGENNIPAELFPTYSTVEYQLGHQGLM
TPTRMNSNRVHNWGTSNGLGLTKSNSCSFSSSSLSSLDQRGLGGRGLGIGPVFVFVVDAS
SSEDELQALKNELLLIVAQLPENAMVGLIVFDSMVRVYDLGFTECLRMVVFHGERKLSTT
QIIDLLGIHTSVRQHLGKPQGVQKHGFVLPVSECEFNITTAIEDIHESSPLTPGHRSPRC
TGAAILVAVGLLEGCSTTTGSHIMVFTSGPATMGPGLVVSQDLNQSIRTHRDINTGHAPF
YWKSCEFYKQISEKLTDLSMVLHLFACSLDQVGATEMRAAVERSGGFMMLAESFESDQFR
KCLRHIFCRDKEGFLNMCFDATIKIITTKDVKICGAIGPCVSLRKKNGSVSDKEIGEGGT
NIWKLGTMTDKMCIAFFFQVSEEQKAQPGTAFFIQFITKYRHGNMGIRKRVTSAARRWVS
SGAPEIAAGFDQETAAAVMARLAVHETEKNFPREVVRWLDKELISFASKFGDYICEDPSS
FRLSSNFSLYPQFMYHLRRSQFIDVFNSSPDETTFFQLTLTREGVVGSLIMIQPTLSQYS
FDGPPIPVLLDVCSLSPDVILLFDSYFYVVIHYGSKIARWKKLGYDRDPNHENFRKLLEA
PEVEAEQLVAQRIPVPKLVRCEQHGSQARFLLAKLNPSATHKSSYVDGSEVIMTDDVSLQ
AFIKHLQELAVQG
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgtcgaattggaagcaatcgaaggcttgcgatggtcatggaattcatggcca
gtatcaaaaaccgaatcaaacaatctggtaatccctttatcgataatgcaaactccattg
atgaaattcaacgagctcccactattatcgtatgacccattgatctgttcccgttgtggg
tccgtcttaaacccgtacgcccgtgttgattacccttctcgaatctgggtctgcccgttt
tgttatcagaaaaattcgtttccaagatcgtatgctgaaatcggcgaaaacaatatcccc
gctgagcttttcccaacttacagtactgttgaataccaattgggtcatcagggtttgatg
actccgacccggatgaattctaatcgggttcataattggggaaccagtaatggtttggga
ttgaccaagtccaattcttgttcgttttcttcatcttcactgtcgagtttggatcagcga
ggactaggagggcggggtttggggattggtccggtgtttgtgtttgtggtggatgcttct
tccagcgaagatgaacttcaagcacttaagaatgaattgttgctgattgttgcacagttg
ccagaaaatgcaatggtggggttgatcgtttttgattccatggtgagggtgtatgatctt
gggtttacagagtgtttgcggatggttgtcttccatggagaacgcaagctttctactacc
cagatcatcgatcttctggggatccatacttctgtgaggcaacatcttggaaaaccacag
ggggtgcaaaaacatggctttgttctaccagtttctgaatgtgagttcaatattaccacc
gccatcgaagacatacacgagtcgtcaccactcacaccgggccatcggtctccacgttgt
accggtgctgcaatactagttgctgtaggccttctagaaggttgctcgaccaccaccggg
tcccacataatggtattcacatctgggcccgcaactatgggaccaggattggtcgtgagc
caagatctaaatcaatcgatcagaactcatcgagacataaacactggtcatgctcctttt
tactggaagtcttgtgagttctacaaacaaatatcggagaaattaacagatttatcgatg
gtgctccatctgtttgcatgttctctggatcaagttggagcaacggagatgcgagcagca
gttgaaagatcgggtggattcatgatgttggcggaatcgtttgaatcggatcaatttaga
aaatgtttgcgtcacattttctgtcgtgacaaagaagggttcttgaatatgtgttttgat
gcaactatcaagataattaccacgaaagatgtgaaaatatgtggcgcgatcggtccgtgt
gtttcgctccggaaaaaaaacggttcagtgagcgataaggagatcggtgaaggtggaacg
aacatttggaagcttggaacgatgaccgataaaatgtgcattgcattcttttttcaagta
agtgaagagcagaaagcgcagccggggactgcgttctttatacagttcataacgaaatac
cgacacggaaacatgggaattcgcaaacgagtaacgtctgccgcaagacggtgggtcagt
agcggtgcaccagaaatcgctgcagggtttgatcaagaaactgcggctgcagtcatggct
agacttgcggttcacgaaactgaaaagaatttcccccgagaggtggtgagatggcttgat
aaggagctaattagttttgcttccaagtttggagactacatctgcgaagatccgtcatcg
tttcgtctttcttcgaatttctcgctctatccgcagttcatgtatcacttacgaagatct
cagttcattgacgtgttcaacagcagtccggatgaaaccacatttttccagctgacgtta
acccgtgaaggggttgtggggtcgttaataatgatccaaccgacgctttcccaatactcg
tttgacggccctccaattcccgttcttttagacgtttgctcgttatcccctgatgtaatt
ctgctattcgattcctacttttatgttgttattcactatgggtccaagatcgctcgatgg
aagaagctggggtatgaccgagacccaaaccatgagaattttcgaaagttgttggaagca
ccggaggtggaggcggagcagctagtggctcaacggatcccagttccaaaactggtgaga
tgcgagcagcatggtagtcaggctaggtttcttttagccaagttgaacccttccgcaacg
cataagtcgagttatgtggatgggtcggaggttataatgacggatgatgtgagtttgcaa
gcatttatcaagcatttgcaagaattggcggttcaaggttga
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