Cynara cardunculus var. scolymus (artichoke): 112504426
Help
Entry
112504426 CDS
T05604
Name
(RefSeq) ent-copalyl diphosphate synthase, chloroplastic-like
KO
K04120
ent-copalyl diphosphate synthase [EC:
5.5.1.13
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00904
Diterpenoid biosynthesis
ccav01100
Metabolic pathways
ccav01110
Biosynthesis of secondary metabolites
Module
ccav_M00927
Gibberellin A12 biosynthesis, GAPP => GA12
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00904 Diterpenoid biosynthesis
112504426
Enzymes [BR:
ccav01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.13 ent-copalyl diphosphate synthase
112504426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Terpene_synth
Terpene_synth_C
Prenyltrans
Motif
Other DBs
NCBI-GeneID:
112504426
NCBI-ProteinID:
XP_024964135
LinkDB
All DBs
Position
Unknown
AA seq
1110 aa
AA seq
DB search
MKTAIFSPSTTFHLRSSPAAAAFSHLPLSSGGVVLKCPNFECKAVSKFPTQEHLDVRQQN
GLLSINSQNHIMEDELDTNEILYLSEEIKGFAERIKGILNAIDDGEINAVAYDTAWVALV
QDVNGSGRPQFPSSLEWIVNNQLPDGSWGDCVTFLAHDRIISTLACVIALTFWNFHPXKC
QKGVEFLKENISKLDTENEEHMTCGFEVVFPSLIDIAKKLNIEVSEDSQVLKEIYARRNL
KLAKIPKNIMHKVPTSLLLSLEGIPDLEWEKLVKLQCKDGSFLLSPSSTAFAFMQTNDEN
CLQYLTNVVTKFNGGGVFSFPBFYPXDLXERIWVVDRLQRLGISRYFKSEIEGCVEYVYK
XWTKDGISWSKNSNVQDIDDTSMGFRILRMHGYDISAGFDDVFSDKFKINEVFVTDVFRQ
FEKDGKFVCFVGETTDSVTVTFNLLRASQVLFPGEKILDEAMKFSYKYLKEKQSSNELLD
KWIVAKDLPGEVGYALDIPWYVSLPRLETRCYLEQYGGEDEAWISKAVYRLGNISNNTYL
EMAKLDYNHCMVRHQLEWNSMQQWYVDFNIERFGMSNITSLLVAYYLAAASVFEPERSNE
RIAWAKTTALVDAITSFFDSRQLSKEHRRDFVDKFRNTPSSVRPAKYGNPWHGLMVALQR
TLHELALDAXMAHSIDIHPQLYHAWEMWLTRWLEEADAIEGQAELMVQTMNMIAGRWTSM
ELFAHPQYRQLSTVTNNLCLEISGSNQSKENRTICFKSETMKAKREHIMQELVQLVFSNS
PDDLDQDLKQTFLTVAKTFYYRTYFDPETINVHISKVLNYTYLEMGKLDYNNCVAIHQLE
WNTMQQWYVDFDMGRFGMSNTTSLLVSYYLAAASVFEPERSIDRIAWAKTTTLLNAISSF
FDSLQLSIEHRKDFVDKFRNKPSSLSPAIYGKPWHGLMAALQGTLHELALDTLMACGRDI
HPQIPHACRKLWERWLTRWQGGGDATEEQAELMVQTISMIDGRWTSKELLAHPQYQRIST
VTNNLCHEISQSHKSKENRITCFDSETANATIECRMQELVQHVLSRSPDDLDRDLRQTFL
AVAKTFFYKAYYDTDTINVHITKVLFETVL
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacggcaatcttctctccatccaccaccttccacctccgatcctctccggctgcg
gccgccttttctcatcttcctctctcctcaggtggtgttgttcttaaatgccccaatttt
gaatgcaaagctgtctcaaagtttccaacacaagagcaccttgatgtacgtcaacaaaat
ggtttgctatctatcaactcgcagaatcacatcatggaggatgaactcgacacaaatgag
attttgtatttgagcgaggagatcaaggggtttgctgagagaatcaaagggatattgaat
gcaattgatgatggagagataaatgcggtggcttacgatacagcttgggttgcactcgts
caagatgttaatggaagtggtcgccctcagttcccgtcaagtttggagtggattgtaaac
aatcaactccctgacggatcctggggcgactgtgtgacctttttggctcatgatcggatc
attagtacattagcatgtgtgatcgcgctaactttttggaactttcatcccgsaaaatgc
caaaaaggagtggaatttctgaaagagaacataagcaaacttgacaccgagaacgaagaa
catatgacgtgcggttttgaagttgtgtttccttcacttatcgacattgcaaagaagctc
aacatcgaagtctcagaagattctcaggtcttgaaagaaatctacgcaagacggaacctg
aagctcgcaaagataccgaagaacataatgcacaaagttccgacatctttacttcttagc
ttggaaggaatacctgatttggagtgggaaaaacttgtaaaacttcagtgcaaagatggg
tcattcctcttatcgccatcatccactgcttttgcattcatgcaaactaatgatgagaat
tgtcttcaatatctcacaaatgttgttaccaaattcaatggtggaggtgtgttttcattt
ccgratttctacccgstggatctttwtgaacgtatttgggtcgttgatcgcctccaacgt
cttgggatttctcgytatttcaagtcagagatcgagggttgtgttgaatacgtctacaag
trttggactaaggatgggatcagttggtcgaaraactcgaatgtacaagatattgatgac
acttcgatgggatttaggattttgcgaatgcatggttacgatatttctgcaggttttgac
gatgtttttagtgacaaattcaagattaatgaggtttttgtgacagatgtgtttcgacaa
tttgaaaaagatggcaaatttgtgtgttttgtcggggaaacaacagactccgtcaccgta
acgttcaatttattacgcgcgtcgcaagtgctctttcccggagagaaaatccttgacgaa
gccatgaagttttcttataaatatttgaaggagaaacaatcatcgaacgagctccttgat
aaatggatcgtcgccaaggacttgcctggtgaggtgggatacgcgctagacataccatgg
tatgtgagtttgcctcgactcgagacaagatgctacttggagcaatacggaggcgaagac
gaagcgtggatctcaaaagccgtataccggctgggaaatattagcaataacacatacctc
gaaatggctaaattggattacaaccactgtatggtcaggcatcagctcgagtggaacagt
atgcagcaatggtatgtggatttcaatatcgaacggtttgggatgagcaatatcacaagt
cttttggtcgcatactacctggctgcagccagcgtattcgagccagaaaggtccaacgag
cgaatcgcrtgggctaaaacgacagccttagtcgacgccatcacctccttctttgattca
cgacagctctcgaaagagcatagaagagattttgtcgacaagttcagaaacacaccgtca
tccgttcgtcctgccaaatatggaaacccatggcatgggttgatggttgcactgcagcga
accctacacgagctcgcattggacgcacwcatggctcatagcatagacattcatccacaa
ctttaccatgcctgggagatgtggctgacaaggtggctagaagaagcggatgccatagaa
ggacaagcggaactgatggtgcaaacaatgaacatgatcgctggtcgatggacatcgatg
gaactcttcgctcatcctcaatatcgacagctttcaaccgtcactaataacctctgtctc
gaaatatccggttccaatcaatccaaggagaatcgtaccatatgtttcaagagtgaaacc
atgaaggcgaaaagagagcacataatgcaagaactagtgcaactcgtattcagcaactca
cctgatgatcttgatcaagatttgaagcagacattcctaactgtggcgaaaactttctac
tacaggacctatttcgatcccgagaccataaacgttcatatctccaaagtactcaattac
acgtatcttgaaatgggtaagttggattacaacaactgtgtggccatccaccagctcgaa
tggaacactatgcagcaatggtatgtcgatttcgatatgggacggtttgggatgagcaat
accacaagtcttttggtctcatactacttggctgcagccagcgtcttcgagccagaaagg
tccatcgaccgaatcgcgtgggccaaaacaaccacattactcaacgccatctcatcattc
ttcgattcactgcagctatcgatagagcataggaaagatttcgtggacaagttcagaaac
aaaccgtcatcccttagtcctgccatatatggaaaaccatggcatgggttgatggctgca
cttcaaggaaccctacatgagcttgcgttggacacactcatggcttgtggtcgagacatc
catccacaaattccccatgcatgccgtaagctctgggagaggtggttgacgaggtggcaa
ggaggaggagatgcaacggaagaacaagcagagctgatggtacaaacaataagcatgatc
gatggccgatggacatcgaaggaactcttggcccatcctcaataccaacggatttcaacc
gtcactaataacctctgtcacgaaatatcccagtcccataagtccaaggagaaccgtatc
acatgcttcgacagtgaaaccgcaaatgcaacgatagagtgcagaatgcaagaattagtg
caacacgtcctcagccgctcgcccgatgatcttgatcgggatttgaggcagacgttcctt
gccgtcgcgaaaactttcttctacaaggcctactatgatacagacacaataaatgttcat
atcaccaaagtattgttcgaaactgtactttaa
DBGET
integrated database retrieval system
