Cynara cardunculus var. scolymus (artichoke): 112507357
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Entry
112507357 CDS
T05604
Name
(RefSeq) importin-4-like isoform X1
KO
K20221
importin-4
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112507357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccav03009
]
112507357
Ribosome biogenesis [BR:
ccav03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
112507357
Pre-60S particles
112507357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
IBN_N
HEAT_2
Vac14_Fab1_bd
Cnd1
RIX1
DUF3385
MMS19_C
Phage_TAC_15
TIP120
Proteasom_PSMB
Acyl_CoA_thio
Cnd3
Motif
Other DBs
NCBI-GeneID:
112507357
NCBI-ProteinID:
XP_024967679
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All DBs
Position
LG 2:9847664..9870147
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AA seq
1086 aa
AA seq
DB search
MPDNEARRQAEDQIKRLVRDPQVVPSLIHQIRTAKTPNVRQLSAVLLRKKITGHWPKLPD
ELRHLVKHYLIESVITDYSPSVRRASANAVSIIAKYAVPRGEWPDLLPFLFQWSQSAQED
DREVALILFNSLTETIGDSFRPYFADLHLILLKYLQDENNSVRIAVLKYILRQTLYFSYL
CFNFGYFRNYSIMNVISLCTLEPYLLNRAVGAFIESTHDESVVVKFREFVPGILNISRQC
LASGEENIAIIAFEIFDELIESPAPLLGESIKAIVQFSLEVCSTSDLESNTRHQAMQIIS
SLVRYKSNSLKKHNLIIPILRIMCPLLTEVTTNNDEDDDLSPDRAAAEVIDTMSLKLSKH
VFPPVFEFASESSQNVYPKVREASVMVLGVISEGCSELMKEKLEPILHITLGALRDPEQV
VRGASSYALGQFAEYLQPEIISHYERVLPRILRSLQDATDDVKEKSYYALAAFCANMGEE
VLRFIDPLMEKLLATLQNSPRLVQETCMSAIGSVASATDKAFVPYVERVLESMRTFMLLT
KNEDLRARARATELVGIVAMVAGRERMEPILPPFIEAAISGYGLEYNELHEYTHGFFSNV
AEILEDGMVRYLPYVVPLAFSSCNLDDGSAVHIHDSYEDEDVGIAGVSSDDEAQDEPRVR
NFSIRTGVLDEKAAATQALGLFALHTKNAYAPYLEESLKIMVKHSIYFHEDVRLQAVTGL
KHILTAANAFLQGRNNRPSTMRKILDSVMTIYIKTMNEDEDKEVVAQACMSVAGIIKDFG
YVAVDPYMPRLVESTLVLLCQKSACQQVESDSEINPGPNELLMDAVTDLLPASAKALGSH
FALIFATLFDPLMDFVRESNSPQGRTMVVACLAEVAQHMGAPISGYVDKVMPLVLEELAS
SSATNRRNAAFCVGELCKNGGEFGLKYFGDVLRGLYPLLGESEPDHAVRDNAAGAVAKMI
TSHQDSVQLDQVLPALFHVLPLKEDHEESIPVYSCICSLVLSSNSQILKLVPDLVRVFAQ
VAISPLETQQVKLQIGGAFSHLVSLYGHQMKPMLRSMPPTYARALAAIVAQSLQSSSATA
TCPSTT
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgccggacaatgaggcacgccggcaagccgaggatcaaattaagcgcctggtaagggat
ccgcaggtggttccgtcacttatccaccagatacgcactgcaaagacgcctaatgtccga
cagctctctgccgttctcctccgtaagaagatcactggtcactggcctaagcttccggat
gagcttcgccaccttgtcaaacattatctcattgaaagcgtcattacggattacagtcca
tctgtgaggcgagcgagtgcaaatgcggtgagtatcattgcgaagtatgctgtcccacgt
ggggaatggccagacttactgcctttcttattccagtggagtcagagtgcacaagaagat
gacagagaggtggcattgatattgttcaactccttaaccgagacaattggggattcattt
cgaccatattttgcagacttgcacttaattctactcaagtacctacaagatgagaacaat
agtgttagaattgctgttctcaagtatattttacgtcaaactttgtacttcagttatttg
tgtttcaattttggatattttagaaactattctattatgaatgtgatctcactatgcact
ttggaaccctatttgttgaacagggcagttggggcttttattgagtccactcatgatgaa
tctgtagtggttaaatttcgtgagtttgtccccggcatattgaatatttcaagacaatgc
cttgcctctggagaggaaaatattgccataattgcttttgagatttttgatgagctgatt
gaatctccggcaccccttcttggagaatcaatcaaagccatagtgcagttctctcttgag
gtttgctcaacttctgatttggaatctaacactcgtcatcaggctatgcaaattatttca
tcgcttgtgagatataaatccaattcccttaagaagcacaacttgatcatcccaatcctc
cgaattatgtgcccattgcttacagaagtgaccaccaacaacgatgaagatgatgatctg
tcaccagatcgagctgcagcagaagttattgataccatgtctttaaagttgtcaaagcat
gtgtttccacctgtttttgaatttgcttctgagagcagtcagaatgtatatccaaaggtc
cgagaagcttctgtcatggttttgggtgtgatctcagagggttgttcggagttgatgaaa
gagaagcttgaacccattctccatattaccttgggggctttaagagatcctgaacaggtt
gtaagaggagcttcatcatatgcattaggacaatttgccgagtatcttcagcctgaaatt
atatctcattacgaaagagttctccctcgtatcttaagatccttacaggatgcaactgat
gatgtgaaggagaaatcatactatgcattggcggccttttgtgcgaacatgggtgaggaa
gttctccgctttattgatcctttgatggaaaaactacttgccactctccaaaatagtcca
agattggtacaggaaacgtgcatgtctgcaattggttcggttgcatctgctacagataaa
gcatttgtcccttatgttgaaagggttctggaatcgatgagaactttcatgttgcttaca
aaaaacgaggacctccgtgcacgagcaagggctactgaattagtggggatagttgcaatg
gttgcaggaagggaaaggatggaaccaattttaccaccatttattgaagctgcaatttct
gggtatgggctggagtacaatgaacttcatgagtatactcatggattttttagcaacgtg
gcagaaattttggaagatggaatggttcggtatcttccatatgttgtacctttggcattc
tcttcttgcaatcttgatgatggatctgctgttcatattcatgattcttatgaggatgaa
gatgttggaattgccggagtttcatctgatgatgaagcccaagatgaacccagagtgcga
aatttcagtataagaactggggttttagatgaaaaggctgctgcaactcaagcccttggt
ctatttgcccttcatacaaagaatgcctatgccccatatttggaagagtcactgaagatt
atggtgaagcattccatctatttccatgaagatgtccgacttcaggccgttactggtttg
aaacatattttgacagctgctaatgcctttttacaaggtcgtaataacagaccatccaca
atgagaaaaattctagattctgtgatgaccatttatatcaagacaatgaatgaagatgaa
gacaaggaagttgttgctcaagcttgcatgagtgtagcaggcatcatcaaggattttgga
tatgttgctgtcgatccttacatgcctcggcttgtagagtcaactctggtattgctgtgc
cagaagtcagcctgtcagcaagtagaatctgacagtgaaatcaatcctggacccaatgaa
ttgctcatggatgctgttacagatctacttcctgcttctgccaaggctctgggttcccac
ttcgcgcttatctttgcaactctatttgatccgttaatggattttgtgagagaatcaaac
tcaccacaaggtcggaccatggtggttgcatgtcttgctgaagttgctcaacatatgggt
gctccaatttctggctatgtagataaagtgatgcccttggtacttgaagaattagcttca
tcatcagcaaccaataggaggaatgctgcattctgtgttggagagttgtgcaagaatggt
ggcgaatttggtctgaaatactttggtgatgtgttgcgaggcctttacccattgcttgga
gaatctgagccagaccatgcagtaagggacaatgctgctggtgcagttgcaaagatgatc
acgtcacaccaggattccgttcaactagatcaggtcctccctgctctcttccatgttctt
cctttgaaagaagatcacgaggaatccatccctgtttatagttgcatttgcagccttgtt
ttatcatccaactcacagatccttaagctagttccagatttggttagggtatttgcacaa
gtagccatctcaccacttgaaacacaacaagttaagcttcaaataggaggggctttttct
cacttagtatcactttacggtcatcaaatgaagcctatgttgagaagcatgccaccaaca
tatgcccgtgcactagctgctattgtagcgcagagtttacagtcgtcatcagccacagca
acatgcccatctacaacttaa
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