Cynara cardunculus var. scolymus (artichoke): 112508736
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Entry
112508736 CDS
T05604
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 12-like isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
112508736
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccav01002
]
112508736
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccav04121
]
112508736
Enzymes [BR:
ccav01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112508736
Peptidases and inhibitors [BR:
ccav01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
112508736
Ubiquitin system [BR:
ccav04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
112508736
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH
UCH_1
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
112508736
NCBI-ProteinID:
XP_024969227
LinkDB
All DBs
Position
LG 3:34756333..34779331
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AA seq
1116 aa
AA seq
DB search
MTLMTPPPMDAEEDEMLVPHSDFAATEGPQPMEVAPAEAANSVDAPTVDDPPSARFTWTI
ENFSRLNAKKLYSDVFFVGGYKWRVLIFPKGNNVDHLSMYLDVADSSTLPYGWSRYAQFS
LAVVNQIHNKFTIRKDTQHQFNSRESDWGFTSFMPLSDLYDPSRGYLLNDTCIVEADVTV
RKVVDYWSHDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSGS
IPLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTV
VEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEG
DNRYHAEQLGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDR
EDGKYLSPQADRSVRNLYTLHSVLVHSGGVHGGHYYAYIRPTLSDQWFKFDDERVTKEDM
KRALDEQYGGEEELPQANPGFNNSPFKFTKYSNAYMLVYIRESDKEKIICNVDEKDIAEH
LRIRLKKEQEEKEQKRKEKAEAHLYTIIKVARDEDLREQIGKDIYFDLVDHDKVRSFRIQ
KQISFALFKEDVAKELGIPVQYQRFWLWAKRQNHTYRPNRPLTPQEEAQSVGHLREVSNK
ANNAELKLFLEVELGQDLRPISPPEKTKEEILLFFKLYDPLKEELRYVGRLFVKGTGKPI
EILARLNELAGFAPDEEIELFEEIKFEPNVMCEHIDKKLTFRGSQLEDGDIICFQKPLKA
ENTETCRYPDVPAFLEYVHNRQVVRFRALEKPKEDEFSLELSKLNNYDDVVERLAHHLHL
DDPSKIRLTSHNCYSQQPKPQPIKYRGVEHLSDMLAHYNQTSDILYYEVLDIPLPELQGL
KTLKVAFHHATKDEVVIHTIRLPKQSTVGDVISDLKTKVELSHRDAELRLLEVFYHKIYK
IFPLNEKIENINDQYWTLRAEEVPEEEKDLGPQDRLIHVYHFMKDTVQNQQVQNFGEPFF
LVIREGETLAEVKIRIQKKLQVPDEEFLKWKFAFLSLGRPTYLQDSDIVSSRFQRRDVYG
AWEQYLGLEHCDNSPKRSYAANQNRHTFEKPVRIYN
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgactctgatgacacctcctcccatggatgcagaggaggacgagatgctagtcccacat
tccgatttcgctgccacagaagggcctcagccaatggaagttgcaccagcagaagctgcc
aattctgtcgatgcaccaactgttgatgatccaccatcagcacggtttacatggaccata
gaaaatttttcgaggttgaatgccaaaaagttgtattctgacgttttctttgtcggaggt
tataaatggcgagtgctgatattcccaaaaggaaacaatgttgaccatctgtcaatgtac
cttgatgtcgctgactcctcaacgctgccatatggctggagtagatatgctcaattcagc
ttagcagtggttaatcaaattcataacaagtttaccattagaaaagatacacaacatcag
ttcaattcacgagaaagtgattggggcttcacttcatttatgcctctaagtgacctatat
gaccccagtagaggttatcttctgaatgatacatgcatagttgaagctgatgttacagtg
cggaaggttgttgattactggtcacatgattcaaagaaggagactggttatgttggtctt
aagaatcaaggtgctacctgctacatgaactccctgcttcagacattataccatatccct
tattttaggaaggctgtgtatcatatgccaacaactgaaaatgatatgccatcagggagc
attcctctggctttgcagagtttattttataagcttcaatacagtgacacaagtgttgcc
acgaaagagttgacaaagtcttttggctgggatacatatgattcttttatgcagcatgat
gttcaagaactcaatcgggttctctgtgagaagcttgaagacaaaatgaagggaacagtt
gtggagggtacaatacagcaattatttgaaggacaccatatgaactatattgaatgcata
aacgttgactacaaatcaacaagaaaggagtctttttatgatcttcagcttgatgtcaaa
ggttgccgtgatgtgtatgcctcttttgacaagtacgtggaagtagaacggcttgaaggt
gacaacagatatcatgctgaacaacttgggttacaggatgcaaagaagggcgtcctgttc
attgatttcccccctgttcttcaactccagttgaagcgttttgaatatgatttcatgcga
gacacaatggtgaagataaatgatcgctacgaattccccttgcaacttgatcttgataga
gaggatgggaaatatttatcacctcaggcagacagaagtgttcgcaacctttacactctt
cacagtgtattggttcacagcggtggggtacatggtggacattattatgcctatatccgg
ccaaccctttcagatcaatggtttaaatttgatgatgaacgtgtaaccaaagaagacatg
aagagggcactggatgaacagtatgggggcgaggaggagttgcctcaagcaaatcctggg
ttcaataactctccatttaaatttacaaagtattcaaatgcatatatgcttgtgtatata
cgtgaaagtgacaaggagaaaataatctgtaacgtggatgagaaggacatagcagagcac
ctaaggataaggttgaaaaaagaacaagaagaaaaggagcaaaagagaaaggagaaagca
gaagcacatttatatactattataaaggttgctcgagatgaggacctccgtgaacagata
gggaaggatatatattttgatcttgtggatcatgacaaagttcgtagctttcgcatccaa
aaacaaatatcttttgcgcttttcaaggaggatgtagctaaagaattgggtatacctgtg
caataccaacgtttctggctatgggcaaagcgtcaaaatcacacttatcgcccgaatcgt
ccattgacgcctcaagaagaagctcagtctgttgggcatttgagagaggtatcaaataag
gcaaacaacgcagagcttaagctgtttctggaagtagaacttggacaggatttacgccca
atttctccacctgagaagactaaagaggagattctacttttcttcaaactttatgatcct
ttgaaggaggaacttcggtatgttgggcggctctttgtgaagggtaccggaaagccaata
gaaatactggcaaggctgaatgaactggctggctttgcacctgatgaagaaatcgaacta
tttgaggaaattaagtttgaacccaatgttatgtgtgaacacatcgacaagaagctaact
tttcggggtagtcagcttgaagacggggacatcatttgctttcagaaaccccttaaggct
gaaaacactgaaacatgtcgctatcccgatgttccggcttttctggagtatgttcacaat
cgtcaggttgtacgttttcgtgcgctggagaagcccaaggaggatgagttctctcttgaa
ttatcaaaacttaacaattatgacgatgttgttgaaagacttgctcaccatctacactta
gatgatccatctaaaatcaggcttacatctcacaactgctactctcagcaacctaaacca
cagccaatcaagtatcgtggagtggaacatttgtcagacatgctggcccactacaatcag
acttcagatattttgtattatgaagtactggatatccctctgccagaactgcaaggcctg
aaaactctgaaagttgccttccatcatgctactaaagatgaagtggtaatacataccatt
agattgccaaagcaaagcacagtgggggatgtgattagtgaccttaagacaaaggttgag
ttgtctcatcgagatgcagaacttcgactacttgaggttttctaccacaaaatttacaag
attttccccctgaatgaaaaaatcgagaatattaatgaccaatactggacattacgtgct
gaggaggttccagaagaagaaaaggacctgggtcctcaggaccgtctaattcatgtttat
cattttatgaaagacactgttcagaaccagcaagtccagaactttggggaaccattcttt
ctcgtcattcgtgagggtgagacattagctgaagttaaaataaggatccagaagaagtta
caggttccagatgaagagtttttaaagtggaagtttgcatttctgtcattggggcgtccc
acataccttcaggactctgatattgtctcgagtcgttttcagagaagagatgtttatggt
gcttgggaacaatatttgggattggagcactgtgacaattcacccaagaggtcatatgct
gcgaatcagaaccgtcacacattcgagaaaccagttagaatttacaactag
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