Cynara cardunculus var. scolymus (artichoke): 112510153
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Entry
112510153 CDS
T05604
Name
(RefSeq) uncharacterized protein LOC112510153
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
112510153
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccav03400
]
112510153
Enzymes [BR:
ccav01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
112510153
DNA repair and recombination proteins [BR:
ccav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
112510153
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Motif
Other DBs
NCBI-GeneID:
112510153
NCBI-ProteinID:
XP_024971235
LinkDB
All DBs
Position
LG 3:29276220..29280550
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AA seq
327 aa
AA seq
DB search
MSASTDLPSVSPSIKLDSESRKILGPAGNRVKVKEEEKEKESLKKKDLVEKKPKSFVKLV
KRSPQIVVRKNDESADSSCSSKSSSSDGSSVKIPSFKKREKHDPNRLKLQGGEAPLTTLS
IPFKRCDWITQFSDPLYVSFHDEEWGVPVHEDGKLFELLVLSQASAELTWPEILYKRDKF
RKLFENFNPSSIAKFPEDRLLSGRRNGGLLLSEQKLRAIVGNAVALLKIQQEFGSFSSYC
WRFLNHTPIKNGFRYRRQIPTKTPKSEAMSKDMMQRGFRCVGPIVVYSFMQISGMVNDHL
ISCFRYMECNSINVIKDPKQETDDLDE
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcttccactgaccttccatcagtatcaccgtcaataaagctcgattcagaatcg
cggaaaatacttggaccggctggaaacagagttaaagttaaagaagaggagaaggagaag
gagagtttgaagaagaaggatttggtggagaaaaaaccaaagagtttcgtaaaattagtg
aagagatcgccacaaattgttgttaggaagaatgatgaatctgcagacagttcgtgttct
tcgaaatcttcttcttccgatggtagttctgtgaaaataccgagcttcaaaaagagggag
aaacatgatcccaacaggttgaagttgcaaggaggcgaagctcccttaacgacgttgtct
attccgtttaaacggtgcgattggatcacccaattttcagatccactttatgtttctttc
catgatgaagaatggggggttccagttcatgaagacgggaagctgtttgaactactagtt
ttgtcacaagcatctgcagaactcacttggccagaaattctttataagagagataaattc
agaaagctttttgaaaatttcaatccatcatccattgcaaagttccccgaggacaggcta
ttgtcgggcaggcgaaatggtggcctgttgctatcagaacaaaaactacgtgctatcgtg
gggaatgctgttgcgctgcttaagatccagcaagagtttgggtccttcagcagctactgc
tggcgcttcctaaaccacacaccgataaagaatggatttcggtatcgtcgtcaaatacca
actaaaacaccaaagtcagaagcgatgagcaaagatatgatgcaaagagggtttcgttgt
gtgggtcctatcgtcgtctattcgttcatgcaaatatctggtatggtcaatgatcatctc
atatcttgttttagatacatggaatgcaatagcattaatgtcataaaagatccaaaacaa
gaaaccgatgatttagatgaatga
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