Cynara cardunculus var. scolymus (artichoke): 112510178
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Entry
112510178 CDS
T05604
Name
(RefSeq) vacuolar protein sorting-associated protein 32 homolog 2-like isoform X1
KO
K12194
charged multivesicular body protein 4A/B
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03250
Viral life cycle - HIV-1
ccav04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
112510178
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112510178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112510178
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccav04147
]
112510178
Membrane trafficking [BR:
ccav04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
112510178
Exosome [BR:
ccav04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112510178
Exosomal proteins of other body fluids (saliva and urine)
112510178
Exosomal proteins of colorectal cancer cells
112510178
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Snf7
DUF6437
Hydantoinase_B
MACPF_D2
Motif
Other DBs
NCBI-GeneID:
112510178
NCBI-ProteinID:
XP_024971269
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Position
LG 3:9539993..9548982
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AA seq
218 aa
AA seq
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MFTRLFGKPKQEANAVTTLDKLNETLEMLEKKEKVLLKKAAAEVEKAKEFTRAKNKRAAI
QCLKRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGAQAMKAMQKAVNID
DVDKTMDEINEQTENMKQIQEALSAPIGAAADFDEDELEAELEELEGAELEEQLLQPATT
TPTTSVYAPAGKQPTRPAPRQNKAEEDELAALQAEMAL
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgtttactcgattgtttggcaaacccaaacaagaagctaacgcggtcacaacgttagac
aagttaaatgagacacttgaaatgctagagaagaaagagaaggtacttctaaagaaagct
gctgcagaggttgaaaaggcaaaggaattcactagagcaaagaataaaagggcggcaata
caatgtctaaagcgaaagagactttatgaacagcaagttgaacaacttggaaattttcaa
ttacgtattcatgatcagatgataatgcttgagggtgcaaaagctaccacagagacggtg
gatgcattgagaactggagctcaagcaatgaaggccatgcagaaggcagtgaatattgat
gacgtggacaaaacaatggatgaaataaacgagcaaactgagaacatgaaacaaatccaa
gaagcattgtcagcacctattggtgcagcagcggattttgatgaggatgaattggaggct
gaacttgaagaattagaaggagctgagttggaggaacaacttctccaacctgccacaact
acccctacaacctcagtgtatgcacctgccggcaaacaaccaacacgtcctgctccacgg
cagaacaaagccgaggaagatgaacttgctgcattgcaggccgaaatggcattataa
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