KEGG   Cynara cardunculus var. scolymus (artichoke): 112510178
Entry
112510178         CDS       T05604                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 32 homolog 2-like isoform X1
  KO
K12194  charged multivesicular body protein 4A/B
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03250  Viral life cycle - HIV-1
ccav04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    112510178
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    112510178
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ccav04131]
    112510178
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ccav04147]
    112510178
Membrane trafficking [BR:ccav04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    112510178
Exosome [BR:ccav04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   112510178
  Exosomal proteins of other body fluids (saliva and urine)
   112510178
  Exosomal proteins of colorectal cancer cells
   112510178
SSDB
Motif
Pfam: Snf7 DUF6437 Hydantoinase_B MACPF_D2
Other DBs
NCBI-GeneID: 112510178
NCBI-ProteinID: XP_024971269
LinkDB
Position
LG 3:9539993..9548982
AA seq 218 aa
MFTRLFGKPKQEANAVTTLDKLNETLEMLEKKEKVLLKKAAAEVEKAKEFTRAKNKRAAI
QCLKRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGAQAMKAMQKAVNID
DVDKTMDEINEQTENMKQIQEALSAPIGAAADFDEDELEAELEELEGAELEEQLLQPATT
TPTTSVYAPAGKQPTRPAPRQNKAEEDELAALQAEMAL
NT seq 657 nt   +upstreamnt  +downstreamnt
atgtttactcgattgtttggcaaacccaaacaagaagctaacgcggtcacaacgttagac
aagttaaatgagacacttgaaatgctagagaagaaagagaaggtacttctaaagaaagct
gctgcagaggttgaaaaggcaaaggaattcactagagcaaagaataaaagggcggcaata
caatgtctaaagcgaaagagactttatgaacagcaagttgaacaacttggaaattttcaa
ttacgtattcatgatcagatgataatgcttgagggtgcaaaagctaccacagagacggtg
gatgcattgagaactggagctcaagcaatgaaggccatgcagaaggcagtgaatattgat
gacgtggacaaaacaatggatgaaataaacgagcaaactgagaacatgaaacaaatccaa
gaagcattgtcagcacctattggtgcagcagcggattttgatgaggatgaattggaggct
gaacttgaagaattagaaggagctgagttggaggaacaacttctccaacctgccacaact
acccctacaacctcagtgtatgcacctgccggcaaacaaccaacacgtcctgctccacgg
cagaacaaagccgaggaagatgaacttgctgcattgcaggccgaaatggcattataa

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