Cynara cardunculus var. scolymus (artichoke): 112512759
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Entry
112512759 CDS
T05604
Name
(RefSeq) uncharacterized protein LOC112512759
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
112512759
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccav03400
]
112512759
Enzymes [BR:
ccav01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
112512759
DNA repair and recombination proteins [BR:
ccav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
112512759
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Motif
Other DBs
NCBI-GeneID:
112512759
NCBI-ProteinID:
XP_024974653
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All DBs
Position
LG 5:14859872..14861738
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AA seq
412 aa
AA seq
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MCSSNSKSNHATTPATTTVSDINGRPVLQPATSNTVPLNSPLLERRSLKKTLSLPKSISM
TPSPTPPHTTAKTPISPKLKSPRQPAVKRSDMTSSSDKLVLPLPTKCTTARSMIPVKKSK
KCTTTGDHHLHNSVETTTNSLVVKYSSAAIVDSPGSIAAARREQVAVMQVQRKMRIAHYG
RSKSAKYDSCSKLTSYFDPNSLPSANIREEKRCSFITPNSDPIYVAYHDHEWGVPAHDDK
VLFELLVLTGAQVGSDWTSVLKKRQQFREAFSGFDAEIVSKYSEKKITSIGSDYGIEVSL
VRGVVDNSKSIIKINDAFGSFDNYVWGFVNHKPIATQYKSSHKMPVKTSKSEAISKDMVR
RGFRQVGPTVVHSFMQAAGLTNDHLTTCPRHHQCVSVSLSDTTPSKSLISVD
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgtgctcttcaaactccaaatcaaaccatgccactactccggccaccaccaccgtctcc
gacatcaacggccgtccggtgcttcagccggccacctccaacacagtaccacttaactct
ccgctcttggaaagacgttcacttaaaaagaccctctcccttccaaaatccatctccatg
actccatctccgacgcctcctcacaccaccgccaaaactcccatatccccaaagctcaaa
tcaccacggcagccggccgtcaagcgtagcgatatgacttccagctccgacaagcttgtt
ctaccactacccaccaaatgtacaacagcaagatccatgattccggtgaagaagtccaag
aagtgtactactaccggtgatcatcatttgcataattctgtggaaaccactactaattcg
ttggtggtgaagtattcatcggcggcaatcgtggattccccggggagtatagcggcagca
cggcgagaacaggtggcggtgatgcaggttcagagaaaaatgaggatcgctcactatgga
agatctaaatctgctaagtatgatagttgcagcaagcttacatcttactttgatcccaac
tcacttccttccgccaatatcagagaagagaaaagatgcagcttcatcactcccaactca
gaccccatatatgttgcttaccatgatcacgaatggggagttcctgctcatgatgacaag
gtgttgttcgaactattggtgctaacgggtgctcaggtcggatcggattggacttcggtt
ctaaagaaaagacaacaattcagggaagcgttttcgggatttgatgcggaaattgtgtca
aagtattctgagaaaaaaataacatcaatcggtagtgattatgggattgaagttagtctt
gtccgaggggtcgttgacaactctaaatctattattaagatcaatgatgcgttcgggtca
ttcgacaactacgtctggggattcgtgaatcataagccaatcgcaacgcagtataaatca
agtcacaagatgcctgttaagacatcgaaatccgaagccataagcaaagacatggtgcgc
agaggattccgacaagtgggacccactgtcgtccactcgttcatgcaggccgccggtctc
actaatgatcatctcaccacttgtcctcgccaccaccaatgcgtctccgtctccctatca
gacacgacgccgtccaaatctctaatttccgttgactaa
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