Cynara cardunculus var. scolymus (artichoke): 112512823
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Entry
112512823 CDS
T05604
Name
(RefSeq) exocyst complex component SEC8 isoform X1
KO
K06111
exocyst complex component 4
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112512823
Membrane trafficking [BR:
ccav04131
]
Exocytosis
Tethering complex
Exocyst complex
112512823
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec8_N
EXOC6_Sec15_N
Vps54_N
Sec8_C
MRG
Motif
Other DBs
NCBI-GeneID:
112512823
NCBI-ProteinID:
XP_024974731
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Position
LG 1:complement(6065497..6081295)
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AA seq
1052 aa
AA seq
DB search
MGLFDGLPVPKDKEYLRDDLENVDESWTVARFDSLPHVVHILTSKDRETEIQALKDQSDI
VEEVVDEVVQTYHGGFNRAIQNYSQILRLFSESTQSIRTLKVDLGNAKRVIGARNKQLHQ
LWYRSMTLRHIISLLDQIENIAKVPARINKLIDDHQFYAAVQLHVQSARMLEREGLQTVG
ALQDVRSELTKLRGVLFYKVLEALHAHLYNTGEYSSATPSMDEKDDVIPTTTVAAFSMNN
SQSLSRRTRLQKGDSHVGASGFASSVDGGSSYDGHDDDGTLDIQDGADNNGKDMKNIPRL
PTWLSESTPDEFVETMRKSESLPHVKYLQTMVECLCMLGKVAAAGAIICQRLRPTIHEII
TSKIKAQADYVNSSRPGVGQAARTATTGLHYVKGQLQSYQLPKQKQKNGTLLAGTLLAVS
PVSPVMAPMGAAQSAAKELLDSILDAIVRIFDNHVVVGELLESKSSQQAPMNTPKSMVAE
ISGNPDSEASRDTGGYTIGFSMTVLQSECQQLICEILRATPEAASADAAVQTARLANKTP
SKEKREDGLTFAFRFTDATLSVPSQGLQGRNRKGQNVQEGYGSASLLPEQGIYLAASVYR
PVLQFTDKIALMLPEKYSQLGNDGLLAFVENFVKDHFLPTMFVDYRKGVQQAISSPAAFR
PRANPAAAYSPSVSKGRPVLQGLLTIDFLAKEVLGWAQAMPKFSGDLVKHVQTFLERTYE
RCRASYTEAVLEKQSYMLIGRHDIDNLMRRHPASACLPTSLAQANADGHVTGTDAETDGI
ELEMSELLMKLRPIKQESLIRDNNKLILLASLSDSLEYIAESIERFGNASGKASDQVEND
VKPTPFHHKRSSSLPPKDLASFAEDYRKLAIDCLKVLRVEMQLETVFDMQVMATREYLED
QDAEEPDDYVISLITQITRRDEVIAPFIAPQKRNYVFGGICGVASHASIKALAEMKRINL
FGVQQICRNTIALEQALSAIPSINSESVQTKLDHVRTYYELLNMPVEALLAFITEHDRLF
TPIEYYNLLKVQVPGREVPDDAKARMADILPI
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgggactctttgatggattgcctgttcctaaagataaagagtatttgagagatgatctc
gagaatgtagatgagagctggactgtagcacgatttgattcgttacctcatgttgtccat
atcttgacctcaaaagaccgagagactgaaatccaagcattgaaagaccagagtgatatt
gttgaggaagttgtggatgaagttgttcaaacttatcatggtggattcaacagagcaatt
cagaattattcacagatattgaggttatttagtgagtctactcagagtatccggactcta
aaagttgatttgggtaatgcaaaaagagttatcggtgctcgtaataaacagttgcatcaa
ctttggtatcgctccatgacattgaggcacataatctccttgctagatcaaatcgagaac
atagctaaggttccagctcgtattaacaagcttattgatgatcatcagttttacgcagca
gttcagttgcatgtccaatcagctagaatgcttgaaagagagggacttcagacggttggt
gctcttcaagatgtccgatctgagctgacaaaattgcgtggagttctcttttacaaagtg
ctggaagctttgcatgctcatctttataataccggtgaatatagctcagctacccctagt
atggatgagaaggatgatgttattcccaccaccacagttgctgctttttcaatgaataat
tcacagtcactctcccggagaaccagattgcagaaaggtgacagtcatgttggtgcatct
ggatttgctagttctgttgatggaggttcctcatacgacggccatgatgacgatggcaca
cttgacattcaggatggtgctgacaataatggaaaggatatgaagaatattcctcgtctt
ccaacatggctttcagaatccactcctgatgaatttgttgaaacaatgagaaaaagtgaa
tctcttcctcatgtgaagtatttgcagaccatggttgagtgcctttgcatgcttggcaaa
gttgcagctgctggtgctataatctgccaaagattgagaccgacaattcatgagatcatc
acatcaaaaattaaagctcaagccgattatgtaaattcttctaggcctggtgttggccag
gctgctcgaactgctacaacaggtcttcactatgtaaaaggacagttgcagagctaccaa
ctaccaaaacaaaaacaaaagaatgggacattgttagctggaacactattggcagtcagc
cctgtctcgcctgtgatggctcccatgggtgcggcacagtctgcagcaaaggaacttctt
gattctattctggatgctattgttcggatatttgataaccatgtagttgttggagagctt
cttgaatcaaaatcctctcaacaagcacccatgaacacaccaaaatctatggtggctgag
atatctgggaaccctgattctgaagcatctcgggacaccggaggctacactattgggttt
tccatgacggttctgcagagtgaatgccaacaactcatatgtgagattttgcgagcaact
cctgaagctgcatctgctgatgctgctgttcaaacagctagacttgcaaacaagactcct
tcaaaagaaaagagggaggatggccttacattcgcctttcgcttcactgatgctacacta
tccgttcctagccaggggttacaaggacggaatagaaaaggtcaaaatgtccaagaaggt
tatggttcagcttccctcctaccagagcagggcatatatctagcagcatctgtataccgt
cctgttctacagtttacagataaaatcgctttaatgttgcctgaaaagtattctcaatta
gggaatgacgggttgctggcgtttgttgaaaactttgtaaaagatcacttcctgccaact
atgtttgtggattacagaaaaggcgtgcaacaagcaatatcaagtccagctgcatttcgc
ccacgagcaaatcctgctgctgcttactccccgtcagtttctaagggacggcctgtctta
caaggacttttgaccatagattttctggctaaagaggtgcttgggtgggctcaagcaatg
ccaaaattttctggtgaccttgtgaagcatgtgcaaaccttccttgaaagaacttacgaa
agatgtcgggcatcatatacagaggcagttcttgagaagcaaagttatatgcttattgga
agacatgatatcgataatctgatgcgacgtcatccagcaagtgcgtgtttgccaacttca
cttgctcaggcaaatgcagatggtcatgtcactggcactgatgctgaaactgatgggatc
gagctggaaatgagtgaactactgatgaaactaaggccaatcaaacaggaatccttgatt
cgtgataacaacaaactcatattgttggcctcccttagtgattcgttggagtacattgct
gaatctatagaaaggtttgggaatgcatcaggaaaagcatctgatcaagtagaaaatgat
gttaagccgacaccttttcatcataaacgaagtagcagtctacctcctaaggatctggca
tcatttgctgaggattacagaaaactggcaattgattgcctaaaggttttacgtgtagag
atgcaattagaaacagttttcgatatgcaggtaatggcgacaagggaatatttagaggac
caagatgctgaggaacctgatgattatgttatatctttaatcactcagataactcgtaga
gacgaggtcattgctcctttcattgctccacaaaaacggaactatgtatttggtggaatc
tgtggtgttgcatcacatgcatccatcaaggctttggcagagatgaaacgcatcaacctt
tttggggttcagcagatttgtaggaatacaattgcactagaacaggctctgtcggccatc
ccttcaatcaatagtgaatctgtgcaaacgaagttggatcatgttcgaacttactacgaa
ctgctaaacatgccagttgaggccttgcttgctttcattacagagcatgaccgcttattc
actcccattgagtactacaatcttctgaaagtgcaagtgcctggtcgggaagttccagac
gatgccaaagctaggatggccgatatcttacctatttaa
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integrated database retrieval system
