Cynara cardunculus var. scolymus (artichoke): 112516280
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Entry
112516280 CDS
T05604
Name
(RefSeq) protein RMD5 homolog
KO
K23333
E3 ubiquitin-protein transferase RMND5 [EC:
2.3.2.27
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccav04121
]
112516280
Enzymes [BR:
ccav01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112516280
Ubiquitin system [BR:
ccav04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
CTLH complex
112516280
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CTLH
STIV_B116-like
Rota_NSP3
CLIP_SPH_Scar
SAPIS-gp6
HsbA
DUF4578
LXG
MscS_porin
Motif
Other DBs
NCBI-GeneID:
112516280
NCBI-ProteinID:
XP_024979066
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Position
LG 8:19866545..19877642
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AA seq
278 aa
AA seq
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MELKTVRDAFDRVAKKQKLSTSRYQQVIDQVGDEIKQAMTDIQSVDPPSSIDHKSVITNL
KRKLDTVIPQEQLEKSQKELNTNLSQYPKILGKFFDTDISKAYRSVDFDLHIVNQIIISQ
LYHEGLFDVADILINEAQEPEIISLRCQFAEMHQILKALRARNLEPALSWVLANRQKLQQ
SGNEFLKLMGCLLWPGKLETSPYSDLLLPAKWEDLIKEFTMQFCSLIGVSFKNPLGLTIE
KRRSRVHVCNANIGHETTIGSKQCSSPPPIVVNSNLVS
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggagctgaaaactgttagagatgcatttgatcgagttgcaaaaaaacaaaaattatca
acttctaggtaccaacaagtgattgatcaggttggcgatgagattaaacaagcaatgaca
gacatccaatcagttgatcctccctcctctatcgatcataaatcagtcatcacaaacctg
aagcgcaagctcgacacagttatcccacaggaacagttggagaaatcacagaaggagtta
aatacgaacctcagccaatacccaaaaatcttgggtaaattttttgataccgatatatca
aaggcatacagaagcgtggactttgacttgcacatagtcaatcaaatcatcataagccag
ctttaccatgaaggtctctttgatgtagctgatatattgataaacgaggctcaggaacct
gagattatctctttgagatgccaatttgcagagatgcatcagattctcaaggcactgaga
gctagaaatctggaacctgctctgagttgggtcttggccaatcgtcagaaacttcagcag
agcgggaacgagttcctgaagcttatgggttgcttgttgtggccagggaagctggaaact
tcaccgtactccgacttattgttgccagccaaatgggaggatttaatcaaagagttcacc
atgcagttttgcagcttaataggagtatcgttcaagaaccctttaggtttgactatagag
aaacgtcgatctcgagttcatgtttgcaatgctaacatcggccacgagacgaccataggt
tcgaaacagtgttcttctcctccccccattgttgtaaatagcaacctagtttcataa
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