Cynara cardunculus var. scolymus (artichoke): 112521077
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Entry
112521077 CDS
T05604
Name
(RefSeq) transcription factor TGA9 isoform X1
KO
K14431
transcription factor TGA
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
112521077
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccav03000
]
112521077
Transcription factors [BR:
ccav03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
Plant bZIP factors
112521077
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DOG1
bZIP_1
bZIP_2
bZIP_Maf
Glycos_transf_2
Motif
Other DBs
NCBI-GeneID:
112521077
NCBI-ProteinID:
XP_024985489
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Position
LG 11:complement(4068097..4073710)
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AA seq
512 aa
AA seq
DB search
MASHRVGETGLSDSGPSHHHHHHQHLPYSVFPAFNPPNTGFINQEGSAFDFGELEEAIVL
QGYKIHSDETKLPLYTTVPRPAATLDMFPSWPMRVHQTPRGSNSSTDSGSAVNAAIASKP
ETHSHIEAESPISSNSRKASSDPQQQQQEAIYRQQLQNLQIPTQQLEMESEGGSPVTTGG
SSHSQQAPKPFSEKKKGIGSTSEKPLDVKTLRRLAQNREAARKSRLRKKAYVQQLESSRI
RLTQLEQDLQRARSQGMFLGGGGGGGNISSGAAIFDMEYTRWLDDDQRHMAELRKGLQSH
LSDGDLRVIVDSFVAHYDEIFQLKTVAAKSDVFHLITGMWTTPAERCFLWMGGFRPSELI
KMLSIQLDPLTEQQVVGIYSLQQSSQQAEEALTQGLDQLHQSLVDTIASGSVNDGVHHMA
VALGKLTNLEGFVRQADNLRQQTLHQLHRILTVRQAAKCFLVISEYYGRLRALSSLWASR
PREAMVSDENSCQTTTDLQMVQSSHIHFSNFG
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtcatagagttggagagactggtttgtcagactcaggaccttctcaccatcac
catcaccatcaacacctgccatactctgtttttcctgcctttaatcctcctaacacaggc
ttcattaatcaagaaggatcagcctttgattttggggagctagaagaagctattgtgctt
caaggatacaagatccatagtgatgaaaccaaattacctttatacacgacagtaccaagg
ccagcagctactctggacatgttcccttcttggcctatgagagtgcatcaaaccccaaga
gggagcaattcaagtacagattcaggatcagcagtaaatgctgcaattgcaagcaaacca
gagactcattctcatatagaagcagaatctccaattagcagtaacagtagaaaagcatct
tccgatccacaacaacaacaacaagaagccatttatcgacaacaactgcaaaatcttcag
ataccaacacaacaacttgagatggaaagtgaaggtggtagtcctgtaaccacaggagga
tcatcacattctcaacaagctcctaaacccttctctgaaaagaagaagggaattggctca
acatcagagaaaccactggatgtcaagacgttgaggcgtttagctcaaaacagagaagca
gcaagaaaaagcaggctcaggaagaaggcatatgttcagcagctcgaatctagcagaata
aggctaactcaactggaacaagatcttcaacgtgctcgatcacaggggatgttcttggga
ggtggaggtggtggaggcaacattagttctggtgcagcgatattcgacatggaatacaca
cgatggcttgacgatgaccagagacatatggccgagttgcgaaaaggattgcaatcacat
ttatcagatggtgatcttcgtgttatagtagatagctttgtcgcacattatgacgagatt
ttccagctgaagaccgtggcggctaaatccgatgtcttccacttgattactggcatgtgg
actaccccagcggaacgatgcttcctctggatgggcggttttcggccctccgagcttatc
aagatgttgtcgattcaacttgatccgcttacggaacaacaagttgtggggatttatagc
ctgcaacagtcatcacaacaagcggaagaagcgttaacgcaagggttggatcaactacat
cagtcgttggtagacaccatcgctagcggatctgtgaacgatggggtccaccatatggcg
gttgccctcggaaaacttacgaatctcgaaggctttgttcgccaggccgataatttaaga
caacaaacgcttcatcaattgcatcggatattgacggttcgacaagcggcgaaatgtttc
ttggtgattagcgagtattacggtcgcctacgagccttgagttcgctttgggcgtctcgg
ccacgcgaggcaatggtaagtgatgaaaattcgtgccaaacgacgacggatttgcaaatg
gtgcaatcttcacatattcatttctcaaactttggatga
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