Cynara cardunculus var. scolymus (artichoke): 112523193
Help
Entry
112523193 CDS
T05604
Name
(RefSeq) PAP-specific phosphatase HAL2-like
KO
K01082
3'(2'), 5'-bisphosphate nucleotidase [EC:
3.1.3.7
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00920
Sulfur metabolism
ccav01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
112523193
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccav03016
]
112523193
Enzymes [BR:
ccav01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.7 3'(2'),5'-bisphosphate nucleotidase
112523193
Transfer RNA biogenesis [BR:
ccav03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
112523193
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Inositol_P
Motif
Other DBs
NCBI-GeneID:
112523193
NCBI-ProteinID:
XP_024988463
LinkDB
All DBs
Position
LG 12:complement(27184567..27188243)
Genome browser
AA seq
455 aa
AA seq
DB search
MSVFPSNLGTKTPQPFFFNNNFLKTHLKLFVSFHNRNYPKSRNPILCLPNSNKKPLFSDE
MEKNSNWVAAIESAPDGKYDMELEVAVKAVHVACLLCQKVQENLIFNGNEDVQAKDDNSP
VTVADWSVQATVSWILSQAFGAQNVSVVAEEDIEALSKSNAISLLSSVVKTVNDSLSAAS
IFGIEPPVTALETTQVLEAISRCNSTGGPTGRFWVLDPVDGTLGFVHGDQYAIALALVEN
GEVVLGVLGCPNYPMNKEWLDYQNGYRRILSRLTKSSSESWGGKGCVLYAKKGSKKAWMQ
PLVSGDKGWVWPNSARPIKVSAIDNPILATFCEPVEKANSSHSFTQGLAHSVGLRNQPLR
VYSMVKYAAIARGDAEIFMKFARAGYKEKIWDHAAGVVIIQEAGGVVTDAGGRPLDFSKG
IYLQGLDRGIIACAGSSLHEKIMRAVDASWNSSSL
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtttttccttccaatttggggaccaaaaccccacagcctttcttcttcaacaac
aattttctgaaaacccatttaaagctcttcgtttccttccataatcgcaattacccaaaa
tccagaaaccccattttgtgtctccccaattcgaataaaaaacccctgttttctgacgaa
atggagaagaacagcaattgggttgcagccattgaatcagccccagatgggaaatacgat
atggaattggaagtcgcggtgaaagctgttcatgttgcttgtttgctttgtcaaaaagtt
caagaaaatttgatctttaatggtaatgaagatgttcaagccaaagatgacaattcccct
gtcacagttgctgattggagtgtgcaagcaactgttagctggatattatcccaagcattt
ggagctcaaaatgtatcagttgttgcagaagaagatattgaagccctttccaaaagcaac
gcaatcagtctcctgtcatccgttgtaaaaaccgtcaacgattccttatccgccgcatcc
attttcggcatcgaacctccggtcaccgctctggaaaccactcaagttctcgaagccatc
agtcggtgcaactcgaccggtgggcccacaggccgattctgggtactcgacccggtggat
ggcacccttggatttgtgcatggggaccagtatgctatcgctctagcactggtcgaaaat
ggggaagtggtgctcggggttcttggttgcccgaactacccgatgaacaaggagtggtta
gattaccaaaatgggtatcggaggattctttcgagattgactaaatcaagctcggaaagt
tggggcggaaaagggtgtgtgctttatgcaaagaaaggtagcaagaaagcttggatgcag
ccgttggtaagcggagataagggttgggtgtggccgaactctgcgaggccaatcaaggtg
tcagctattgataatcctattttggctacgttttgtgaaccggtggagaaggcaaactcg
agccactcgttcacgcaagggttagcccatagcgtcggcctcaggaatcaaccattacga
gtgtacagtatggtgaaatacgcagccatcgctcgtggagacgcagagatcttcatgaag
ttcgcgagagctggttataaagagaagatatgggatcatgccgccggagttgtcatcatt
caagaagccggcggtgtcgtcacagacgccggaggccgaccactcgacttctctaaaggt
atctacttgcaaggactagatcggggtattatcgcctgtgccggatcctcattacatgag
aaaatcatgagagccgtcgatgccagctggaactcttctagcctttga
DBGET
integrated database retrieval system
