Cynara cardunculus var. scolymus (artichoke): 112523561
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Entry
112523561 CDS
T05604
Name
(RefSeq) uncharacterized protein LOC112523561
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
112523561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccav03400
]
112523561
Enzymes [BR:
ccav01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
112523561
DNA repair and recombination proteins [BR:
ccav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
112523561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Motif
Other DBs
NCBI-GeneID:
112523561
NCBI-ProteinID:
XP_024988985
LinkDB
All DBs
Position
LG 12:4440775..4443006
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AA seq
324 aa
AA seq
DB search
MSKENAIRRNVIEKKNSSSSSSSPARGNKEKLSTQSLLSKHLKKVYPVGIQKTSSLLSLS
SLSLTLSHNSSGSFTDSSSTLEQTISSALHLIAPTPARREPPVAKTSAVHAPVPQPSLDP
TNCEEGLRRCNWITKSSDKVYVQFHDECWGVPVYDDNQLFELLSLCGMLMDYNWTEILKR
KDLFREAFAGFEPNIVAKMGENDIMEIASNKDIMLAESRVRSIVENAKCILKIAKAHGSF
SGYMWGSVNYKPTINRCRHPRNVPLRTPKAEAISKDLLKHGFRLVGPVIVYSFMQAAGMS
IDHLVDCFRFSECVNLAERPWRHV
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaagaaaacgccatcaggagaaatgttatcgaaaagaagaacagcagcagcagc
agcagtagtcctgcaaggggaaataaagagaagttatcaactcaaagcctattatccaaa
cacttgaagaaagtttatcctgttgggattcagaaaacaagctcacttctctccctttct
tcactttctttaaccctttcgcataactcgagtggctcctttacggattcatcttctacc
ttagagcagaccatctcatctgcactgcacctcattgcaccaacacctgctagaagagag
ccgcccgtggctaaaactagcgccgttcatgctccagttccacaaccgagtttggatccc
accaactgtgaggaaggattgagaagatgcaactggattactaaaagcagtgataaagtt
tacgtacaattccatgacgagtgctggggagttccggtgtatgatgacaaccaactgttt
gagctgctctcattgtgtggaatgttgatggattacaattggactgaaatcctgaaaagg
aaggatcttttcagagaagcatttgctggatttgaaccaaacattgttgcaaagatggga
gagaacgatatcatggaaatagcctctaacaaggacatcatgttagccgaaagtagagtc
agatccatcgttgaaaatgccaaatgcatcctcaagattgcgaaagcacatggatctttt
agcggatacatgtggggttcggtaaactacaaaccaaccattaatagatgcagacatcca
agaaacgtacctctaagaacaccgaaagcagaagccattagcaaggatttactgaaacat
gggttccgattggtcgggccagtgatcgtgtattcgttcatgcaagctgctggaatgagc
attgaccatcttgttgactgttttaggtttagtgaatgtgttaatcttgctgaaagacca
tggaggcatgtctaa
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