Cynara cardunculus var. scolymus (artichoke): 112526472
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Entry
112526472 CDS
T05604
Name
(RefSeq) ABC transporter B family member 6-like isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112526472
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccav02000
]
112526472
04147 Exosome [BR:
ccav04147
]
112526472
04090 CD molecules [BR:
ccav04090
]
112526472
Enzymes [BR:
ccav01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
112526472
Transporters [BR:
ccav02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
112526472
Exosome [BR:
ccav04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112526472
CD molecules [BR:
ccav04090
]
Proteins
112526472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_29
AAA_15
AAA_23
Zeta_toxin
AAA_22
RsgA_GTPase
AAA_16
DUF87
Phage_holin_2_4
Motif
Other DBs
NCBI-GeneID:
112526472
NCBI-ProteinID:
XP_024992521
LinkDB
All DBs
Position
LG 14:complement(9587730..9602232)
Genome browser
AA seq
1398 aa
AA seq
DB search
MMARGLFGWSPPRQQPLTPVSEVSEPPESPSPYMDPGIDAVPPEVDDVMDETEEIEPPPE
AVPFSRLFACADRLDWVLMVVGSVAAAAHGTALVVYLHYFAKIIQLLSHADESPDMQFHR
FKELALTLVYIAGGVFAAGWIEVSCWILTGERQTAVIRSRYVQVLLNQDMSFFDTYGNNG
DIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLTIGFINCWQIALITLATGPFIVAAG
GISNIFLHRLAESIQDAYAEAASVAEQAILYIRTLYAYTNETLAKYSYAASLQATLRYGI
LISLVQGLGLGFTYGLAICSCALQLYVGRFLVTRGKAHGGEIVTALFAVILSGLGLNQAA
TNFYSFEQGRIAAYRLYEMISRSSSTEDHDGNIPDSVHGNIEFRNVYFSYLSRPEIPILS
GFYLTVPAKKTVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIG
LVTQEPALLSLSIRDNIAYGRDATPLQIEDAAKTAHAHTFISSLEKGYETQVGRAGLSLT
EEQKIRLSVARAVLSSPSILLLDEVTGGLDFEAERSVQEALDLLMLGRSTIIIARRLSLI
RNADFIAVMEEGHLMEIGTHDELIASDGHYAELLRCEEAAKLPRRMPVRTYNENATFQIE
KDSSASHSYQEPSSPKFAKSPSLQRASNLHAARSPDSAYNSHESPRNPSPPEKMVENGSH
LDGTDKEPSIRRQDSFEMRLPELPKIDVHSIRRQTSHGSDPESPVSPLLTSDPNNERSHS
QTFSRPNSQFGDDPVKVKAVKEKQPRKEPPMWRLVELSFAEWLYAVLGSTGAAIFGSFNP
LLAYVIALIVTEYYRKEADRHMRHEVDKWCLIIACMGVVTVIANFLQHFYFGIMGEKMTE
RVRRLMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRLSIFIQDSTAIVVA
LLIGMLLQWRLALVALATLPVLTVSAIAQKLWLAGFSKGIQEMHRKASLVLEDAVRNIYT
VVSFCAGNKVMELYRLQLRKIFTKSFLHGMGIGFLFGFSQFLLFACNALLLWYTALSVKN
GDVDLSTAIKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDPDDISAL
KPPNVYGSIELKHVDFSYPTRPEILVLSNFSLKVNGGQTVAIVGVSGSGKSTIISLIERF
YDPVAGQVILDGRDLKQFNLRWLRNHMGVVQQEPIIFSTTIRENIIYARHNASETEIKEA
ARIANAHHFISNLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIES
ESSRVVQEALDTLIMGNKTTILIAHRAVMMRHVDNIVVLNGGRIVEEGAHDSLMSKNGLY
VRLMQPHFGKGIRQHRHI
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atgatggctagaggtttatttggttggtcaccaccgcggcaacagcctctaacaccggta
tcagaggtgtcggagccaccggagtccccgtctccatacatggacccaggtatcgatgcg
gtacctccggaagttgatgatgtgatggatgagacggaggagatcgagccgcctccggaa
gcagtgccgttttcgaggctgtttgcgtgtgctgataggcttgattgggtgcttatggta
gttggatcggttgctgcggcggcacatgggacagcacttgtggtttatttgcattatttt
gctaaaattattcagttgctgagtcatgctgatgagagtccggatatgcagtttcatagg
ttcaaagagcttgctctgacccttgtttatattgctggtggtgtttttgctgctggttgg
atagaggtttcatgttggattcttactggagaaaggcagactgctgttattaggtcaaga
tatgtccaagtacttctaaatcaagatatgagtttcttcgacacctatgggaacaatgga
gacattgtgagtcaagtattgagcgatgtgttgcttatccaatctgctctcagtgaaaaa
gttggtaattatattcataacatggctacattcttcagtggccttacaattggatttatc
aactgctggcagattgccctcataactttagctactggtccgtttattgttgccgcagga
ggaatatcaaatatatttctccacaggcttgctgagagtattcaagatgcatatgctgaa
gcagctagtgttgctgaacaggcaattttatacattagaaccttgtatgcttacacaaat
gaaacattagcaaaatattcttatgcagcctctctacaagctactttgagatatggtata
ttgataagtcttgtgcaaggacttgggcttgggttcacatatggacttgcaatatgctct
tgtgctttgcaactttatgtcggaagattcttagttacacgcggaaaagctcatggtgga
gaaattgtaacagctctgtttgctgtaatcttaagtggccttgggttgaatcaagcagcc
acaaacttctattcatttgagcaaggaaggattgctgcatatagactttatgagatgata
agccgttcatcatccactgaggatcatgatggaaacattcctgattctgtacatggtaac
atcgagtttcgaaatgtgtatttcagttatttgtctcgtcctgaaatccctattttaagt
ggattttacctgactgttcctgccaagaaaactgtggcacttgttggaagaaatggctct
ggtaaaagtagcattataccacttatggaacggttctatgatccgacattaggggaagtt
cttttggatggagagaacataaaaaacctgaaattagaatggctaaggagccaaattggt
ttagtcactcaagaacctgccttgctaagcttgagtataagggataatattgcctatggc
agagatgctactccacttcaaatagaagatgctgctaaaactgctcatgcacatacattt
attagttcgcttgagaaaggatacgagacacaggtaggcagggctggtttatctctgaca
gaagaacagaaaataagactttctgttgctagagcagtgctttccagtccatctatcctt
cttcttgacgaggtcactggtggattggactttgaagctgaaagatctgttcaggaggct
ctagatctcttgatgttaggtcgttctaccatcataatcgctcggcggctttctttgata
aggaatgctgatttcatagctgtgatggaggaaggccacctaatggagattgggacacat
gatgaactgatagcatcagatgggcattacgcagagcttctaagatgtgaagaagcagct
aaactcccaagaaggatgcctgtgagaacctacaacgaaaatgcaactttccaaattgaa
aaagattcttcggcaagtcacagctaccaagaaccatcctctcccaaatttgccaaatca
ccatcacttcagagagcttctaatctacatgcggcaagatctccggattctgcttacaac
tcgcatgaatctccaagaaatccaagcccaccagaaaaaatggttgaaaatggttcgcac
ttggatggaacagacaaagaaccgtccataagaaggcaagatagttttgagatgagactg
ccagagttgccaaagatcgacgtccattctattcgacgtcaaacatcccatggctctgat
cctgaatcacctgtttcaccacttttgacatctgatcccaataatgagcgctcacattca
caaacttttagtcggcctaactctcagtttggtgatgatccagttaaagtcaaagcggtg
aaggaaaagcaacctcgaaaagaaccaccaatgtggaggcttgtagagctgagctttgct
gaatggctttatgctgttctgggaagcactggtgctgcaatctttggttcttttaaccct
cttcttgcctatgtgattgcattaattgtgacagaatattacagaaaagaggctgacaga
catatgcggcatgaagtagataaatggtgcttaatcattgcctgtatgggtgtcgtgact
gtaatagcaaattttttgcagcacttttactttggtataatgggggagaaaatgaccgaa
cgagttaggagactgatgttttctgcaatgctccgcaatgaagtcggatggtttgatgaa
gaagagaacagtgctgataccttgtccatgcgattagcaaatgatgcaacatttgtgaga
gctgctttcagcaaccgactttctatattcatacaagatagtacagccattgttgtggca
ctattgatagggatgcttctacagtggcgtttggccctagtggctttggccacgctgcca
gttcttactgtttctgccattgctcagaagttatggctagctggattctcgaagggcata
caggagatgcacaggaaagcatcgttggtccttgaggatgctgttagaaatatctacact
gttgtgtcgttctgtgccggtaacaaagtaatggagctttaccgattgcagttacgcaag
atattcacaaagagcttcttgcatggcatgggtatcggctttttatttggcttttcacag
ttccttcttttcgcctgcaatgctcttctcctctggtacactgcactctctgttaaaaac
ggagacgtggatctctccactgccataaaggagtacatggtcttttcttttgctactttt
gctctcgtggagcctttcggtttggctccatatattctcaaaagacggaagagtctgata
tccgtatttgaaataatcgatcgagtacccaagattgatccagatgatatctccgctttg
aagcctccaaatgtttacggaagtatcgagttgaaacatgttgatttctcttatccaact
cgtccggagattctggtactgagcaatttcagtctcaaagtcaacggtggtcaaacggtt
gctatcgtgggcgtttcaggatccggaaaaagcacaataatctctttgatagagcggttt
tacgatccggttgctggtcaggtgattttagacggtcgtgatttaaagcaatttaacctg
agatggttacggaatcacatgggtgttgttcaacaagaacccatcatattttcgacaacc
ataagggaaaacatcatatacgcaaggcacaatgcaagcgagacggagatcaaagaggct
gcgagaatagcaaatgctcaccatttcatcagcaacttgcctcatgggtatgacacacat
gttggaatgaggggtgtggacttaaccccgggccagaagcagcggatcgcaattgctaga
gtcgtgctaaagaatgcacccatcttgttgttggatgaggcaagctcgtcgatcgagtca
gaatcgagccgggtggttcaggaggcacttgataccctaatcatgggaaacaaaaccacc
attcttatagcccatagagctgttatgatgaggcatgttgacaacatcgttgttcttaac
ggaggtcgaattgtggaagaaggtgcccatgattcattaatgtcgaaaaatggtctgtat
gttcggttgatgcaaccgcacttcggaaagggtatacgtcaacataggcatatttag
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integrated database retrieval system
