Corynebacterium canis: CCANI_05245
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Entry
CCANI_05245 CDS
T09233
Symbol
sigE
Name
(GenBank) ECF RNA polymerase sigma factor SigE
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
ccaw
Corynebacterium canis
Brite
KEGG Orthology (KO) [BR:
ccaw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccaw03021
]
CCANI_05245 (sigE)
Transcription machinery [BR:
ccaw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CCANI_05245 (sigE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
HTH_23
Sigma70_ECF
HTH_AsnC-type
Xre-like-HTH
GerE
HTH_17
TnsD
Motif
Other DBs
NCBI-ProteinID:
WJY74896
LinkDB
All DBs
Position
1154772..1155293
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AA seq
173 aa
AA seq
DB search
MPTWSELVQEHADSVYRLAFRLTGNQHDAEDLTQETFMRVFRSLKNYKPGTFEGWLHRIT
TNLFLDMVRHRSKIHMEALPEDYDRVPGNDMTPEQAYHFTHLDPALQRALDELSPDFRVA
VVLCDVVGMTYDEIAETLGVKMGTVRSRIHRGRSQLRASLESNPDAEQYVAAR
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgccaacgtggtctgagctggtccaagagcacgcggatagcgtgtatcggctcgcgttt
cggttgaccggcaaccagcacgacgcggaagacttgacgcaagagacgtttatgcgcgtg
ttccgttcgctaaagaactacaagccgggcaccttcgaggggtggttgcaccgcatcact
acgaacctatttttggatatggtgcggcaccgcagcaagatccatatggaggcgctgccg
gaggattatgaccgcgtgcccggcaacgatatgacgccggagcaggcgtaccatttcacg
cacttggatcccgcgctgcagcgggcgttggatgagctgagccccgatttccgtgtcgcc
gttgtattgtgtgatgtcgttggtatgacctatgacgagatcgcggagacgctcggcgtg
aaaatgggtaccgtgcgtagccgcattcaccgaggtagaagccaacttcgcgccagcttg
gaatccaatccagatgctgagcaatatgtagcagcacggtag
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