Corynebacterium canis: CCANI_08240
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Entry
CCANI_08240 CDS
T09233
Symbol
sigA
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
ccaw
Corynebacterium canis
Brite
KEGG Orthology (KO) [BR:
ccaw00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CCANI_08240 (sigA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccaw03021
]
CCANI_08240 (sigA)
Transcription machinery [BR:
ccaw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CCANI_08240 (sigA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
WJY75476
LinkDB
All DBs
Position
1824083..1825846
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AA seq
587 aa
AA seq
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MTGFAVPLAMQHTTSSTQGERAYVAATDPSETAQTEGTTTTVKKTAAKKAVRKTARKAAP
RTARKAAAPAAAASAADTTGADSGASGAAAVGAAGADAAATESTQAPAAKKTAAKRTAKK
TVKKAAKKTAKKTAKKTAKKTAKKTTAKKTTAAKKTTAKKAAPKTAKKTVRKAAPKVAIP
VQDDDDQLPGNQLDDDLIDDSGDDDYAALISSDDDDYDDPLPADEDNERIDDEDEDEEGS
SGGGSDDDEEDDGSSVWDEDESAALRQARKDAELTASADSVRAYLKQIGKVALLNAEQEV
SLAKRIEAGLYATHRMEQMEEAYAAGNKEAKLTPAVKRDLRAIARDGRKAKNHLLEANLR
LVVSLAKRYTGRGMAFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMAD
QARTIRIPVHMVEVINKLGRIQRELLQDLGREPTPQELAKEMDISEDKVLEIQQYAREPI
SLDQTIGDEGDSQLGDFIEDSEAVVAVDAVSFTLLQDQLQDVLQTLSEREAGVVKLRFGL
TDGMPRTLDEIGQVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgacaggatttgctgttccgctggctatgcagcacactacttcgagtactcaaggcgaa
agggcgtacgtggcagccactgatccctcagaaacggcacagaccgaaggaaccaccacc
acggtgaagaaaacggcagcaaagaaagccgtacgaaaaactgcccggaaggcagcaccc
cgcaccgcacgcaaagcggcggcacccgccgccgcagcctcggcggcggataccactggg
gccgattcgggtgcgagcggggcggctgctgttggggcggctggggcggacgctgccgcg
acggaaagcacccaggcgcccgccgccaaaaagacggcggccaaacggaccgcaaagaag
acggtaaaaaaggccgcgaagaagaccgcgaagaaaacggccaaaaagacagccaagaaa
accgccaagaagaccacggccaaaaagacgaccgccgccaagaaaaccaccgcgaagaaa
gcggcaccaaagaccgccaagaagaccgtaagaaaggcagccccgaaggttgccatcccg
gtgcaggatgatgacgatcagctgcccggcaatcagctcgacgatgacctcatcgacgat
tccggcgacgacgattacgccgcgctgatctcctccgacgatgacgactacgacgatccg
ctccccgcagacgaagacaacgagcgcatcgacgacgaagatgaagacgaggaaggctcc
tccggcggcggcagcgacgatgacgaagaagacgatggttcttccgtctgggacgaggac
gaatccgccgcattgcgtcaggcgcgcaaggacgccgagctcacggcgtcggcagactcc
gtccgcgcctacctcaagcaaatcggcaaggttgccctgctcaacgccgaacaggaagtc
tccctggcaaaacgcatcgaagccgggctctacgccacgcaccgcatggaacaaatggag
gaagcctacgccgccggcaataaagaagccaagctcacccccgccgtgaaacgcgacctg
cgggccatcgcacgcgacgggcgcaaagcgaaaaaccacctgctggaagcgaaccttcgc
ctcgtggtgtccctggccaaacgctacaccggccgcggcatggcatttttggacctgatc
caagaaggcaaccttggcttgatccgcgccgtggaaaagttcgactacaccaagggctac
aaattctccacctacgccacctggtggatccggcaggcgatcacccgcgccatggccgac
caagcgcgcacgatccgcatccccgtgcacatggtggaagtgatcaacaaacttgggcgc
atccagcgcgaactgctccaagacctcggccgcgaacccacgccgcaggaactggccaag
gaaatggacatctccgaggacaaagtgctggaaatccagcaatacgcccgggagcccatc
tcgctggaccaaaccatcggcgacgagggcgacagccaactcggcgactttatcgaagac
tccgaagccgtcgtggccgtggacgcggtatcctttaccctgctccaagaccagctgcaa
gacgtcctccaaaccctgtccgaacgcgaagccggcgtggtgaaactacgcttcgggctt
accgacggcatgccccgcaccctcgatgaaatcggccaagtgtacggggtgacccgcgaa
cgcatccgccagatcgaatccaagaccatgtcgaagctgcgccacccatcgcgctcgcaa
gtgctgcgcgactacttggattag
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