Caretta caretta (Loggerhead turtle): 125622407
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Entry
125622407 CDS
T09292
Symbol
CHD6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6 isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccay03036
]
125622407 (CHD6)
Chromosome and associated proteins [BR:
ccay03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
125622407 (CHD6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
BRK
ResIII
DEAD
CHDCT2
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
125622407
NCBI-ProteinID:
XP_048676421
EnsemblRapid:
ENSCECG00000005242
LinkDB
All DBs
Position
14:complement(28897981..29079894)
Genome browser
AA seq
2723 aa
AA seq
DB search
MIMKIQKKEKQLSHSLMSGASLPCEYKPQAPFASSADQEDLCPHVNIADLASHYQCPEEE
PGEAVQKRTPSQNGMQDSGGGGTGVKKKRKKKAPGELEVGEKGALEREMKPKRKREPKEP
KKPREPKKPREPKQKEAAKKPRKPREAKAPKEPKEKKSSTEPAPKAKPKKASKEQGPTPV
EKKKKGKRKNEIPVESLELDQGLLSPSLQSPEESAESADSQKRRSGRQVKRRKYNEDLDF
KVVDDDGETIAVLGAGRASALSASTLAWQAEEPPEDDANIIEKILASRLVQKEVHPGGLA
YEMEEFYVKYRNFSYLHCKWATLEELEKDPRISQKIKRFRNKQAQMKHIFTEPDEDLFNP
DYVEVDRILEVAHTKDSDTGEEVTHYLVKWCSLPYEESTWELEEDVDPGKIKEFETLQIP
PEIKHVERPASEFWQKLEKSRDYKNSNQLREYQLEGMNWLLFNWYNRKNCILADEMGLGK
TIQSITFLSEIFLMDIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHGSQISRQMIQQY
EMVYRDMQGNPLPGIFKFHVVITTFEMILADCPELKKIQWRCVVIDEAHRLKNRNCKLLE
GLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPQQFPSETAFLEEFGDLKTEEQVKKLQ
SILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGANQHNMP
NLINTMMELRKCCNHPYLINGAEEKILEDFRKSHSPEALDFQLQAMIQAAGKLVLIDKLL
PKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDR
FVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNS
YEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVEDLLRKGAYGALMDEEDEGS
KFCEEDIDQILQRRTQTITIQSEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKIAEL
DTDAKNEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPTRSRRLNEKTRRY
LRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVYCVKHYKGDEKIK
SFIWDLITPTKDGQNQALQNHSGLSAPVPRGRKGKKTKNQMLLPEIKNADWLASCNPDIV
LHDDSYKKHLKQHCNKVLLRVRMLYYLKAEVLGEVADKAFEGTPARELDVLLPDIDYVEI
PVDWWNAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKLLSAEQGVNDGAQD
AAERGNVEKEENSGDRIEGLPQQEDSGNLCGEAAEKQDDNVAAQDGSDSERSCWPVSSAL
TARLRRLVTVYQRCNRKELPPRAEMLVPSNHGYWLQEEMFRRAAELDPVNKEMQKRWTRR
EQADFYRTVSSFGVIYDQERKAFDWTQFRAISRLEKKTDESLEKYFYSFVAMCRNVCRLP
LWKEDAGPPDPSIYVEPITEERAARTLYRIELLRKVREQVLKYPQLHERLTLCRPSLYLP
VWWECGKHDRDLLLGTAKHGLNRTDYYIMNDPELSFLDAYRNYAQHKRAGAQGPENLCCL
HQMNSKLYGSPSYCQMERTCESLENEAESQIKLENLEDALSRAEGSPQDMSCDTFLSTVR
DIISMNCDESSLPDSLMCMMYEEKACPSEHSSLAHDSPSCTHVSNSAAKFAEGKLDGDED
PSSCEAEAIRETSFLESLQMGCDQMDSPNEGGEPWPSAPASQPSRSVSTEISDALQRANP
GPGSPVLASTEGVISLGLYGPSLHNLEIKIPPEQRFMGLLHKKGLEDKSVPSQSHSEEEE
EENSEMAADAVEGLRGTPEARTEGNPKANTLAGEESGSSLPAPKNTCPGVNGEAELSGQV
ALQCNSGAGDGEANHKSAAEHLPDWPNSLPPAPSPAAAAQPELPKAGSVSMGGEHWEAGS
AAQMGSSTAWHLEEHKPKQEDDECENKDEEEKEGTGQSRDCPEKYLEEESKSSPCAQVGE
MDELQDSRAPTIAQLLQEKTLYSFSEWPKDRVIINRIDNICHAILKGKWPSSSQQFETQT
LMPTSGLASNAGTRNSFAEPEAPDPSFNNGVLVAQVQKESFLAPAFTKDERKHRQPYEFE
LERDAKPRSLEQLAASHSRPPVVLNGWRDSAGNLARASDGSPGNPTPFPLNSNLPKLGTV
HSLQGSLGMDLSGILQAGLIHPVTGQIVNGSLRRDDAAMRRRRGRRKNVEGMDLIFLKER
SLQTGLQDVQEDQTQPAQSSPHPDGLVTATSTPHTVTAASIRTEKAVPNKSLLDWLRQQS
DYTLDVPGFSTSFSDKPKQRRQRCKDPSKLDINSLTGEERVPVVHKGTGRRLGGAMAPAL
KELPRWLDANLEYAVAADWADIVKLSGFLPESKFNRILTEPVLRDTGPRRRGRRPRSELI
KAPGVVSDSSSGMGPLFMNGLIAGMDLVGLQNMRNMQGIPLTGLVGFPAGFAAVPAGEDV
KSTLSMLPMMLPGMATVPQMFGVGGLLNPPMTTTCTSTAPASLTSTTKSGTSNTEKATED
KQSSQDVKNEPLSEDKPGPSSFSDQTESAITTSSPVAFNPFLIPGMSPGLLYPSMFLSPG
IGMTLPGIQQTRHSEATNLESQKRKRKKAKGEPTNPEPETVSLSEKEAANSQNCTEQTQS
LSSEKEHDIQAEEKELKEINNTN
NT seq
8172 nt
NT seq
+upstream
nt +downstream
nt
atgataatgaaaatacagaagaaagaaaagcagctgtctcattccctgatgtctggcgcc
tcactcccttgcgagtacaagcctcaggcccccttcgccagcagcgccgatcaggaggac
ctgtgtccccacgtgaacattgcagacttggccagtcactaccagtgcccagaggaggag
cctggcgaggctgtacagaagaggacaccatcccagaatggcatgcaggacagcgggggt
gggggcaccggggtgaagaagaaacggaagaaaaaggccccaggggagttggaagtgggg
gagaaaggagctttggagagagagatgaaaccaaagaggaagagagagccaaaggagccc
aagaaacccagggagcccaagaaacccagggagcccaagcagaaggaggcagccaagaaa
cccaggaaaccccgggaggccaaagcccccaaggagcctaaagaaaaaaagagcagcact
gagccggcccccaaggcaaagcccaagaaggccagcaaggagcaaggaccaacccccgtg
gagaagaagaagaaagggaaaaggaaaaacgagatcccagtggagagtttggaattggat
caaggcctccttagcccgtctctgcagagccctgaggagtctgctgagtcggccgacagc
cagaagcgccgctcgggtcgccaggtgaagcggaggaaatacaatgaggacctggatttc
aaagtggtggatgacgatggcgagacgatagcagtgctgggagctgggcgagcctccgca
ctctccgcgtccacgctggcatggcaggcagaggagccccctgaggatgatgccaacatc
attgagaagatccttgcctccagactggtgcagaaggaggttcatccaggcggcctggcc
tatgagatggaggaattctacgtcaagtacagaaacttctcctacctgcactgcaagtgg
gcgacgctggaagagctggagaaagaccccaggatctctcagaagataaagcgctttcgg
aacaagcaggcccagatgaagcatatcttcacagagcctgacgaggatttgttcaaccca
gactacgtggaggtggatcggatcctggaggtggctcacacgaaggactctgacaccggg
gaggaggtgacccactacctggtcaaatggtgctcgctgccgtatgaggagagcacctgg
gagctggaggaagacgttgaccctggaaaaatcaaagagttcgagaccttgcagatccca
ccagagatcaaacatgtggagcgccccgcttctgagttctggcagaaactggagaagtca
cgggactataagaatagcaaccagctacgggagtaccagctggaggggatgaactggctg
ctcttcaactggtacaacaggaagaattgcatcctggcggatgagatgggcctggggaag
acgatccagtcgatcaccttcctttctgagatcttcctgatggacattcatggtcccttc
ctcatcattgcgccgctctccaccatcaccaactgggagcgggagttccgcacctggacg
gagatgaatgctatcgtgtaccatggcagccaaatcagcaggcagatgatccagcagtat
gagatggtgtacagggacatgcagggtaaccctcttccagggatcttcaaattccatgtg
gtgatcaccaccttcgagatgatcctcgccgactgccccgagctgaagaagatacagtgg
cgctgcgtggtcatcgacgaggcccatcggctgaagaacaggaactgcaagctgctggag
gggctgaagcttatggctctggaacacaaggtgctgctgactgggacacccctgcagaac
tcagtggaggagctcttcagcctgctgaacttcctggagccccagcagttcccctcagag
acagcgttcctggaggagtttggggacctgaagacagaggagcaggtgaagaagttacag
tcaatcctgaagcccatgatgctgcggcggttgaaggatgatgtggagaagaacctggcg
cccaagcaggagaccatcatcgaggtggagctgaccaacatccagaagaaatactaccgg
gccatcctagagaagaacttctccttcctgtccaagggcgccaaccagcacaacatgccc
aacctcatcaacaccatgatggagctgcgcaagtgctgcaaccacccctatctcatcaac
ggggcggaggagaaaatcctggaagatttccgtaagtcgcacagcccagaggcgctggac
tttcagctgcaggccatgatccaggcggctggcaagctggtgctgattgacaagctgctc
cccaagctgatcgccggtgggcacaaggtgctgatcttctcccagatggtgcgctgcctg
gacatcctggaggactatctcatccagaggcgatacacctatgagcgcatcgatgggcgg
gtgcgcgggaacctgcgccaggctgccatcgatcgcttctgcaaaccggactcagaccgc
ttcgtcttcctcttgtgcaccagggcgggaggcctgggcattaacctcacagctgccgac
acctgcatcatcttcgattcagactggaacccacagaacgacctccaggcacaggcgcgc
tgccaccggatcgggcagagcaaggccgtgaaggtctatcgcctcatcaccaggaactcc
tacgagcgcgagatgttcgacaaggccagcctcaagctgggcctggacaaggccgtgctg
caggacatcaaccgcaagggcagcaccaacggggtgcagcagctctcaaagatggaggtc
gaagacttgctacggaaaggagcatacggggctttaatggacgaggaagatgaaggctcc
aagttctgcgaggaagatattgatcagatcctgcagcgcagaacccaaacgatcactatc
cagtcggaggggaagggttccacctttgccaaggccagctttgtcgcttcagggaacaga
actgacatttccttggatgaccccaacttctggcagaagtgggctaagatagcagagctg
gacacggacgcaaagaacgaaaaggagagcttagtgatcgacaggccccgtgtccgcaag
cagaccaagcactacaactccttcgaggaggatgagctgatggagttctcggagctggac
agtgactccgacgagcggcccacgcgctcgcggcgcctcaatgagaagacgcggcgctac
ctgcgggctgagtgcttccgcgtggagaagaacttgctcatattcggctgggggcgctgg
aaggatatcctgacccacggacggttcaagtggcacctgaacgagaaggacatggagatg
atttgccgggccctcctggtctattgcgtcaaacactacaagggagatgagaagattaag
agttttatatgggatctgatcactccgacgaaggacggccagaaccaggccctgcaaaat
cactcagggctgtcggccccagtgcccaggggcaggaaggggaagaagacgaagaaccag
atgctgctgcctgagataaagaacgcagactggctggccagctgcaaccctgatatagtc
ctgcatgatgacagctacaagaagcacctgaaacagcactgcaacaaggtgctgctgcgg
gtgcgaatgctctactacctgaaagctgaagtgctgggagaggtggctgacaaagccttc
gaagggaccccggccagggagctggacgtgctgttgccggatatcgactatgtggagatc
ccagtggactggtggaatgcagaggctgataaatcgctgcttattggagttttcaaacac
ggttatgagaggtacaacgccatgcgagcagacccggcactatgcttcctggagaaggtg
ggcatgccagacgagaagctgctgtctgcggagcagggcgtcaatgatggggcacaggat
gctgcagaaagaggaaacgttgagaaagaagagaacagtggagacagaatcgaggggctg
ccacagcaggaggactctgggaatttgtgtggagaagctgctgagaagcaggatgacaat
gtggcagcccaggatggctccgactcagaaagatcctgctggcctgtctcgtccgccctc
acagccagactgcggcggctcgtcaccgtttaccagcgttgcaaccgcaaggagctgccc
ccccgagccgagatgcttgtgcccagtaaccatggctactggctgcaagaggagatgttc
aggagagctgctgagttggacccggtgaacaaggaaatgcagaaaagatggacgagaagg
gagcaggcagatttctaccgcactgtctcctccttcggggtcatctatgaccaggagagg
aaggcctttgattggacccagttccgagccatttcccgcttggagaagaagacagacgag
agcctggagaaatacttctacagctttgtggccatgtgcaggaatgtctgccgtctcccc
ctgtggaaagaggacgcaggtccacctgatcccagcatctacgttgagccaatcacagag
gagcgtgctgcaagaacgctgtaccggattgaacttctaaggaaggtccgggagcaagtg
ctcaagtacccgcagctccatgagcggctcacgctgtgcaggcccagcctgtaccttcct
gtctggtgggagtgtggcaagcatgaccgggacctgctgcttggaacagccaagcatgga
ctgaaccgcactgactactacatcatgaacgatcctgagctgtcatttttggacgcatat
agaaactatgctcagcacaaaagagcaggtgcccaaggcccagaaaacctgtgctgcctc
catcagatgaactccaaactctatggctccccttcatactgccagatggaaaggacctgt
gagtccctggagaacgaagctgagagccagatcaagctcgaaaacctggaggatgcgctc
tcccgagcagagggcagcccccaggacatgagctgcgacacgttcctgtcgacagtgcgg
gacatcatttccatgaactgtgatgagagctccttgccggactctctgatgtgcatgatg
tatgaggagaaggcgtgccccagtgagcacagctctctcgcccatgacagccccagctgt
acacatgtcagcaacagtgctgccaaatttgctgagggcaaactagatggggatgaggac
ccttccagctgtgaggctgaggccatcagagagacctccttcctggagagcttgcagatg
ggctgtgaccaaatggatagtcccaatgaaggtggggagccttggccctcagccccagcc
agccagccctccaggagtgtctccaccgagatcagtgatgctttgcagcgggccaatcca
gggcctgggtcacctgtgctcgccagtacggagggggtgatcagcctaggcctgtatggg
cccagtctccataacttggagataaagatcccaccggagcagaggttcatgggcctgtta
cacaagaaaggcttggaggataaatcggtgccaagtcagagccacagcgaggaggaggag
gaggagaattctgagatggcagcagatgctgtagaaggattgaggggcaccccagaggcc
aggactgaagggaaccccaaagctaacacactagcgggggaggaatctggttccagcctt
cctgctcccaagaacacttgcccaggagtgaatggtgaggcagagctttcaggacaggtg
gcattgcagtgtaacagtggggcaggggatggggaggccaaccacaagagcgctgcagag
catttgccagactggccgaacagcctccccccagcacctagcccagctgcagctgctcag
ccggagctcccaaaggctgggtccgtcagcatgggaggggagcactgggaagctggctct
gctgcgcagatggggagcagcacggcctggcacctggaagagcacaagccaaagcaggaa
gacgatgaatgtgagaacaaagatgaggaagagaaagagggcactggccagagccgagat
tgtccagagaagtatttggaagaggagagcaagagctctccctgtgcccaggttggagag
atggacgagctgcaggattcccgtgcacccaccattgcccagctgctgcaggagaagacg
ctctactccttctcagagtggcctaaggaccgagtgatcattaaccgcatagataatatc
tgtcacgccatcttaaagggcaagtggccctcttctagccagcagtttgaaacacaaacc
ctgatgcccacatcagggttagccagcaacgcaggcactaggaacagctttgccgagcca
gaagccccggaccccagcttcaacaacggagtgttagttgcacaagtacaaaaggaaagc
ttcctggctcctgcctttacgaaggatgaacgaaagcacaggcagccctatgagtttgag
ctggagagagacgccaaacctagaagcctcgaacagttagctgcatcacactcccgtcca
cctgtagtgctgaatggctggcgggactcggcagggaacctggccagagcatctgatgga
tccccaggaaaccccactcctttccccctgaacagtaacctgcccaagttagggacagtg
cactccctgcaggggtccctgggcatggacttgtccggcatcctccaggcagggctaatc
catcctgtcacagggcagattgtcaatggaagcctccggagagatgatgctgccatgagg
agacgacggggcaggagaaaaaatgtggaagggatggaccttatcttcttgaaggagagg
agccttcaaaccgggctgcaggatgttcaggaagatcagacccagcctgcacagagcagc
ccgcacccggacgggctggtcaccgctacctcaactccgcatactgtcacagccgcaagc
atccggacagagaaggctgttccaaacaagagtctcctggactggctaagacagcagtcg
gactacacactcgatgtccctggcttcagcacaagtttttcagacaagcccaagcagagg
aggcagcgctgcaaggaccccagcaaactggacataaactcactcacaggagaggagcgg
gtgcctgtggtccataagggtacaggacggaggttagggggagccatggcaccagcattg
aaggaattgccaaggtggcttgatgcaaacttggagtatgctgttgcagcagactgggct
gacattgttaagctttcaggattcctcccagaaagcaagttcaatcgtatcctaactgag
cctgtgctccgggacaccgggccccgtcgaagagggaggaggccaagaagtgaacttatt
aaagcccctggcgtcgtatcggattcttcttctggaatgggaccgttattcatgaatgga
cttattgctggaatggatctagtgggacttcagaacatgagaaacatgcaaggcatccct
ttaactgggctggttgggtttcctgctggatttgcagcagtgcctgctggtgaggatgtc
aaaagcaccctaagtatgttgcctatgatgctgccaggcatggctactgtaccacagatg
tttggtgtaggaggacttctaaacccaccaatgacaactacttgtacttcaactgctcca
gcttcattaacaagcacaactaaaagtggtacatcaaatacggaaaaagctactgaggac
aaacaaagtagccaggatgtgaaaaatgaacctctgtctgaagacaaacctggtcctagt
tcattttctgatcagacagaatctgcaataactaccagtagtcctgttgcttttaatcca
tttcttatcccaggaatgtcccctggactgctctatccatctatgtttctttcccctggt
attggcatgacattgccaggcatacaacaaaccagacactctgaggcaacaaatctagaa
agccagaagcggaagagaaagaaagctaaaggggaaccaacaaatccagaaccagaaact
gtctcgctgtctgaaaaagaagctgcaaacagtcaaaactgtacagagcaaacccaatct
ctgtcatcagagaaagaacatgacatacaagcagaagagaaggagttaaaagaaattaac
aataccaattag
DBGET
integrated database retrieval system
