Caretta caretta (Loggerhead turtle): 125631203
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Entry
125631203 CDS
T09292
Name
(RefSeq) sodium channel protein type 5 subunit alpha-like isoform X1
KO
K04842
voltage-gated sodium channel type X alpha
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccay04040
]
125631203
Ion channels [BR:
ccay04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
125631203
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
125631203
NCBI-ProteinID:
XP_048693477
EnsemblRapid:
ENSCECG00000020441
LinkDB
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Position
2:14206941..14299904
Genome browser
AA seq
2022 aa
AA seq
DB search
MADFSLPCSNNFCKFTRESLAAIEKRIAAKKECVGQKPEEKPRPQLDLQAFQKLPALYGT
PPQELIGEPLEDLDPYYRDHKTFMVLNKGKTIFRFTATRALCIFSPFHSIRRAVIKILVH
KLFTMFIMCTILTNCVFMAISETPGKSKSPESPVWNKYVEYTFTGIYTFESLIKILARGF
CLNEFTFLRDPWNWLDFSVIVLAYAGAFSDLGSVSVLRTFRVLRALKTISIVPGLKVIVG
ALIQSVKKLTDVMILTVFCLSVFALIGLQLFKGNLRHKCVRVFNYTNGTITSDDKSWDSF
DLFTNDSENVLKKNGTSDSLLCGNGSDAGTCPDKYICLKVGENPDYGYTSFDTFGWAFLS
LFRLMTQDYWERLYQQTLRASGKIYMLFFMLVIFLGSFYLVNLILAVVTMAYEEQNKATI
AETEAKERKFREAMELLKKEQEALADKGNDTMSLCSFEISPLPSKEVKDRSNRRKKNKSL
ETEDYGEDKKIHESQSSDDQRKLALLGLTYGASANQMKRRLSHGSIFNFQISGRDVGSKA
YLGYDEVSSAGENEIQRGSLLVARTGRQLSVQSQMSHSSYPASPNYMQNGKCNNTDGYNG
VVSLMGGGSTRAYSLEPSAPEGLLLPPVMENPRIGDLQSPLCDEGSKMYLAPRLSVDYFN
EPLQRQRAASAVSVITSVLEELEESQQKYPPCLKDFALKYLVWDCCPVWLRIKNKVTILV
MDPFTDLAITVCIVMNTIFMALEHYNMTNTFKFMLRVGNMVFTGIFTAEMILKIIALDPY
YYFQQRWNIFDSLIVTLSLIELGLPRTKGSKGGGTLSVLRSFRLLRVFKLAKSWPTLNTL
IKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKNYGENCHKISEDCKPRWHFMDFFHS
FLIIFRILCGEWIETMWGCMVVAEQPLCLLVFLLVMVIGNLVVLNLFIALLLNSFSADNL
QAPEDDGEMNNLKIAFARIHRGLHLVKHVTWDYCCGQCQHPKKAAKKKNKLAAKNTCVEA
GKEGQNCKENHSNNGTEKTGDKCSVSILEDFITNPNMFVCVPIAEADSDSEDYEEDDDKP
TTFSKTEYSKQQENHLRQRGEQCRSPETWSKGSEVFSEDLSEFNICKQRKDESSQGQKEH
LDYISCSEGSTVDLTNPEELLKQIPELAEDLKEPDNCFPEGCVRHFPCCVMNTTKFPGKT
WWNLRKTCFKVVEHSWFESFIIFMILLSSGALAFEDIHLQKRENIKTMLEFLDKVFTYIF
VFEMFLKWLAYGFRKYFTNAWCWLDFLIVDVSLVTLIANSLGYSDMGAMKSLRTLRALRP
LRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVTLLAGKFGKCVNLTEEK
SELNKNIRNKLDCTTYNNTQKIYWTNVKVNFDNVGSGYLALLQVATFKGWMDIMYAAVDS
RGVELQPQMEKSLSMYLYFVVFIIFGSFFTLNLFVGVIIDNFNQQKKKISGQDIFMTEEQ
RKYYNAMKKLGSKKPQKPIPRPLNKYQGFLFDIVTSQAFDVIIMILICLNMITMMVETDD
QSTEKTYILQKINMLFVAIFTAECIMKLLALRHYYFTNGWNIFDLSVVIMSIVGTVLSGI
VKVFENYFSPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMMSLPALFNIGLLLFLVMF
IYAIFGMANFAYVQWESGIDDMFNFQTFANSMLCLFQITTSAGWDGLLSPILNTGPPFCD
PNIRGAVGECGKPAVGIIFFVSYIIISFLIVVNMYIAVILENFNVATEESTDPLGEDDFD
MFYEVWEKFDPGATQFIEYSALSDFADALAEPLRVAKPNKIELIAMDLPLVSGDRIHCLD
ILFAFTKRVLGESGEMDTLKVQMEEKFMAANPSKLSYEPITTTIRHKQEEVSAIIIQRVY
RSHLIQRSMKQASFLYRHRTSDGDILEDAPEKEGLIAFMVNENYSRNLDKSETVSSTSFP
PSYDSVTGTTNEHLEVKMADSPQSDEPIDCPLSAEREKESIV
NT seq
6069 nt
NT seq
+upstream
nt +downstream
nt
atggctgacttctcactaccatgttctaacaatttctgcaagttcacacgtgaatccttg
gctgctattgagaagcgaatcgctgccaagaaggaatgtgtaggtcagaagcctgaagag
aaacctcggccccagcttgatttgcaggctttccagaagctgcctgctctctatggaact
ccccctcaggagctcattggggaaccactggaggatcttgacccttactacagggatcac
aagacatttatggtactgaacaaaggaaaaacaatcttccgatttactgccacacgtgcc
ttgtgtatatttagcccttttcattcaatcagaagagcagtgattaaaattttggttcac
aaattgttcactatgtttattatgtgcactattttaaccaattgtgtcttcatggctata
tcagagactcctgggaagtctaagtcacctgaatctcctgtatggaacaagtatgttgag
tacactttcactggcatttacacttttgaatcattgataaaaatattggcaagaggattc
tgtctgaatgaattcactttccttcgagatccatggaactggttggatttcagtgtcatt
gttctggcatatgcaggggcgtttagtgatctaggcagtgtttcagtccttcgcacattc
agggttctgagagctttaaaaactatttcaatagtcccaggactgaaggtcattgtaggt
gcactgatccagtctgttaagaaacttactgatgtgatgatcctgactgttttctgcttg
agtgtctttgccctcataggcctccagctctttaagggcaatttgagacataagtgtgtc
agggtttttaactacaccaacggaactattacttcagatgataagtcatgggactccttt
gacttgtttactaacgattcagaaaatgttctcaagaagaatggcaccagtgatagcttg
ttgtgtggcaatggctcagatgctggcacctgtccagataaatatatatgtctcaaagtc
ggggaaaatcctgattatggttacacaagttttgatacatttggctgggcatttctttcc
ttgttccgcctgatgacacaggattactgggagcgtctctatcaacagactctcagagct
tctgggaagatctacatgctcttttttatgctggtcatctttctgggctcattttatctg
gtcaacttgatcctggctgtagtaacaatggcatatgaagagcagaacaaagctactatt
gctgaaactgaggcaaaggaaaggaagtttcgggaagccatggaactgttaaaaaaagag
caagaggcattggctgataaaggaaatgatacaatgtcactttgctcttttgaaatctcg
cctttaccctcaaaagaagtcaaagatagaagcaacaggagaaagaaaaataagtcctta
gagacagaagattatggggaagataaaaaaatacacgaatcacagtccagtgacgatcaa
cgaaagttggctcttcttggtcttacttatggtgccagtgcaaatcaaatgaagcgcagg
ctcagccatggaagcatattcaatttccagatatctggcagagacgttggctccaaagct
tatcttggttatgatgaggtcagcagtgctggggaaaatgaaatccagcgtgggtcactg
ttggttgcacggactggaagacaactgagtgtgcaaagtcaaatgagccatagttcttat
cctgcttctccaaactacatgcagaatggcaagtgcaacaacacagatggttacaatggc
gtggtttcattaatgggaggaggaagcaccagggcatacagtctagaaccatctgctcct
gaagggttattgctccccccagttatggaaaaccctagaataggtgatttgcagagccct
ttatgtgatgaggggagcaagatgtatttggcccctcgtctgtcagtggattattttaat
gagccacttcaaagacaaagggcagcaagtgcagtcagtgtcattaccagtgtcttggag
gaacttgaagaatcacaacagaaataccctccatgcttgaaagattttgccctaaagtat
cttgtatgggactgttgtccggtatggctgagaatcaagaacaaagtgacaattttagta
atggatccatttactgaccttgctatcactgtttgcattgtgatgaatactatcttcatg
gcattagagcactataacatgacaaacacatttaaattcatgcttcgcgtaggcaacatg
gtctttactggcatttttactgcagaaatgatcttgaagatcattgctctagatccttat
tactattttcagcagcgctggaatatttttgacagcttaattgtcaccctcagcttaatt
gaattgggtttacccagaactaaaggcagtaaaggaggaggaaccctatcagttttacgt
tctttcagactgcttagggtcttcaagctggcaaagtcctggccaactttaaataccctc
attaaaatcattggtaactcagtgggtgccctgggtaacctcaccctggttctggcaatc
atagtctttattttcgccgtggtaggaatgcaactttttgggaaaaactatggtgaaaat
tgccataaaataagtgaggattgcaagccacgttggcattttatggattttttccactca
ttccttattatattccgaattctgtgtggagaatggattgagaccatgtggggttgtatg
gtggtagctgagcaaccattatgccttctagtcttcttgctcgtcatggtgataggaaac
ctagtggttctcaacctgttcattgcattactgctgaactccttcagtgctgacaacctc
caagcacccgaagatgatggagagatgaacaatcttaaaattgcatttgctcggatccac
aggggacttcacctggtgaaacacgtaacatgggattactgttgtggacagtgccagcat
ccaaagaaagctgccaaaaagaaaaataaattggctgccaagaacacatgtgtggaggct
ggaaaagaagggcaaaattgtaaagaaaatcacagtaacaatggaactgagaaaactggg
gacaaatgctcagttagcattcttgaagattttatcaccaaccccaacatgtttgtctgt
gtccctattgctgaggcagattctgatagtgaggattatgaagaagatgatgataagcca
accacattctcaaaaactgagtacagtaaacagcaggaaaaccacctgagacagagggga
gagcaatgtagaagcccagaaacttggagtaaaggatctgaggttttctctgaagactta
agtgagtttaacatatgtaaacaaaggaaggatgaatcatcacaaggacaaaaagagcac
ctggattacatcagctgttctgaaggcagcacagtggatctgacaaatcctgaggagctt
ctgaaacagatccctgagctggctgaagacttaaaagaacctgataactgtttcccagaa
ggttgtgttcgacatttcccttgctgtgtgatgaataccacaaagtttccaggcaaaacg
tggtggaacctgaggaaaacctgcttcaaagttgttgaacatagctggtttgaaagcttt
atcatattcatgatcctgctgagcagcggtgcactggcatttgaagatattcatcttcaa
aaaagagaaaacattaaaaccatgttggaatttcttgataaagtcttcacttatatcttt
gtcttcgaaatgtttctgaaatggctggcttatggcttcaggaagtatttcaccaatgcc
tggtgttggcttgatttcctaattgtagatgtctctttagtaactctcatagctaactca
cttggatattctgatatgggagccatgaaatcccttaggactctccgagctttgagacca
ttaagagcactgtcacggtttgaagggatgagggtggttgtaaatgccttgataggtgcc
atcccttccatcatgaatgttctgcttgtctgcctcattttctggctcatttttagtatc
atgggagtgaccctattggcaggaaaatttggaaaatgcgttaacttgactgaagaaaaa
tcagaattaaataaaaatattaggaacaaattggattgcacaacctataacaacacacaa
aaaatatattggacaaatgttaaagtcaactttgataatgttggttctggttatctggct
cttcttcaggtggcgacatttaaaggttggatggacattatgtatgcagcagtagattca
cgaggggtagaattgcagccacaaatggaaaagagtctatccatgtacctctattttgtg
gttttcataatctttggatctttcttcacactgaatctctttgtcggtgtcattattgac
aattttaatcaacaaaagaaaaagataagtggacaagacatctttatgacagaagaacag
agaaaatattataatgcaatgaaaaaactgggatccaagaaaccccaaaaacccatccca
aggccattgaacaaataccaagggtttttatttgacatcgtgacaagccaagcctttgat
gttatcatcatgattctcatctgccttaacatgatcactatgatggtagaaactgatgat
caaagtacagagaagacttacattcttcagaaaatcaacatgctctttgttgccatcttt
actgcagagtgcatcatgaaattattggccctaagacactactacttcaccaatggctgg
aacatatttgatttaagtgttgtcatcatgtccattgttggcacagtgctctctggcatt
gttaaagtatttgaaaattatttttcacctacactcttcagagtcattcgcttggctcga
attggacgaatactaagactcatccgagctgccaaaggaattagaactctcctttttgcc
ttaatgatgtcccttcctgctctgttcaacattggcctcttactttttctggtcatgttt
atttatgccatttttggcatggctaactttgcttatgttcagtgggagagtgggattgat
gacatgttcaacttccaaacctttgctaacagcatgctctgtctcttccaaatcacaaca
tctgctggctgggatggtcttctcagtcctattttaaacactggacctccattttgtgat
cctaacatacgaggtgctgtgggagaatgtggtaaacctgctgtgggtattattttcttt
gtaagttacatcattatatcatttctcattgttgtaaacatgtatatagctgttatttta
gagaacttcaatgttgccacggaggaaagtacagatcctctaggtgaagatgactttgat
atgttttatgaagtctgggagaaatttgatcctggggcaactcagtttattgagtattcg
gcactttcagactttgcagatgctctggcagaacctttacgtgtagccaaaccaaacaaa
attgagctcatagcaatggatcttcccttggtcagtggagataggatccactgtttggat
attttgtttgctttcactaaacgggtgctaggtgaatctggggagatggatactctaaaa
gtacagatggaggaaaagtttatggctgccaatccatccaagctttcttatgaaccaatc
acaaccacaatcagacacaaacaagaggaagtttctgccattattatccagagggtttac
aggagtcatttgattcaacgttccatgaagcaggcctcttttttataccgtcatagaacc
tctgatggtgacatccttgaagatgctccagagaaagaaggcctcattgcattcatggtg
aatgaaaattatagtagaaatttagacaaatcagaaactgtgtcctcaacctctttccct
ccatcctatgacagtgtcactgggaccactaacgagcaccttgaggtgaagatggcagac
tctccgcaaagtgatgaacctatagattgtccactatctgcagagagagaaaaggaatcc
attgtttaa
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