Caretta caretta (Loggerhead turtle): 125639191
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Entry
125639191 CDS
T09292
Symbol
USP47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccay01002
]
125639191 (USP47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccay04121
]
125639191 (USP47)
Enzymes [BR:
ccay01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
125639191 (USP47)
Peptidases and inhibitors [BR:
ccay01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
125639191 (USP47)
Ubiquitin system [BR:
ccay04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
125639191 (USP47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
ubiquitin
Motif
Other DBs
NCBI-GeneID:
125639191
NCBI-ProteinID:
XP_048711795
EnsemblRapid:
ENSCECG00000011984
LinkDB
All DBs
Position
6:30353832..30444870
Genome browser
AA seq
1274 aa
AA seq
DB search
MTPLDQTSDKSILDAGFEVGKKNFLHLTDKDGEQPHIVSESGMTDDGNQERFIGPLPREG
SVGCTNDYVCQNYSYSSILSKSETGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEF
EESEEDAVMSIPYQLQRLFVLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMF
DALEQKWKQTEQADLINQLYQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSNQAFA
SVEEALHAFIQPEILDGPNQYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMH
RIKLNDRMTFPEELDMSTFIDVEDESPQTESCTDSGAENEGSCHSDQMSNDFSNDDGVDE
GICLESSSGAERISKVGIEKNSLLYELFSVMVHSGSAAGGHYYACIKSFNDEQWYSFNDQ
HVSKITQEDIKKTYGGASGSRGYYSSAFASSTNAYMLIYRLKDPTRNAKFLEVNEYPEHI
KQLVQKEKELEEQEKKQREIERNTCKIKLFCMHPVKQIMMENKLEVHKDKTLKEAVEIAY
KIMDIEEAVPLDCCRLVKYDEFHDYLERSFEEEEEDIPMGLLLGGVKSTYMFDLLLETRR
PDQIFQCYKPGEVMVKVHVVDLKTESVAPSISVRAYLNQTVTEFKELISKAVRLPAETMR
VVLERCYNDLRLLSVGNKTLKAEGFFRSNKVFVESSESLDRQMAYTDSHLWKLLDRHANT
IRLYVSLPEHSPGSQFKRTVNQKASGDSGNLDEACARVKGSLGNMISVEAILEESTEKLK
SLSLQQEQEGDNGDSSKSTETSDFENIESPLNEVDSLASAENRELENQTQISDPENFQSE
ERSDSDVNNDRSTSSVDSDILSSSHSSDTLCNVDNAPIPLANGLDSHSITSSRRSKANEG
KKETWDTAEEDSGTDSEYDESGKSMGEAQYMYFKAEPYAADEGSGEGQKWLLVNVDKRIT
LSAFKQNLEPFVGVLSSHFKVFRVYASNQEFESVRLNETLSSFSDDNKITIRLGRALKKG
EYRVKVYQLLINEPEPCKFLLDAVFAKGMTVRQSKEELLPQLREQCGLDLTIDRFRLRKK
TWKNPGTVFLDYHVYEEDINISSNWEVFLEILDEAEKMKSMSQLAVLSRRWRPSEMKLDS
FQEVVLESSSVDELKEKLSEISGIPLEYIEFAKGRGTFPCDISVLEIHQDLDWNPKVSTL
NVWPLYICDDGAVIFYRDKTEELIELTDEQRNELMKKESSRLQKTGHRITYSPRKEKALK
IYLDGAPNKESTQD
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgactcctttggatcaaaccagtgataaatctattcttgatgctggttttgaagtaggg
aagaaaaattttctacatttgacagataaagatggtgaacagcctcatatagtgtcggaa
tcgggtatgacagatgatggtaatcaagagaggtttataggccctctaccaagagaaggc
tctgttggttgtaccaatgattatgtctgtcaaaactactcatactcttctatcctgagt
aaatcagagacaggctatgtgggattagtaaatcaagcaatgacttgctatttgaacagc
ctattgcaaacacttttcatgactcctgaatttagaaatgcattatacaaatgggaattt
gaagaatctgaagaagatgcagtgatgagcatcccttaccagcttcaaagactgtttgtt
ttattgcagaccagcaaaaagagagcaattgaaacaacagatgttacacggagctttgga
tgggatagtagtgaggcatggcagcagcatgatgtacaagagctttgtagagtcatgttt
gatgctttggaacagaagtggaagcaaacagagcaggctgatctcataaatcaactgtat
caaggcaaactgaaggactatgtaagatgtctagaatgtggctatgagggctggagaatt
gacacttacctggatattccattggtcatcagaccttatggctccaaccaggcatttgct
agcgtggaagaagcgttgcatgcgttcattcagccggagatccttgatggccctaatcag
tatttctgcgaacgctgcaagaagaaatgtgatgcaaggaagggcctgcgttttttgcat
tttccatatctgctgactttacagttgaagaggtttgactttgattacaccactatgcac
aggattaaacttaatgatcgcatgacttttcctgaggagctagacatgagcacgttcatt
gatgttgaagatgagtctccccaaactgagagttgcactgatagtggagcagagaatgaa
ggcagctgtcacagtgatcagatgagcaatgatttttctaatgatgatggtgttgatgaa
ggaatctgccttgaaagcagtagtggtgctgaaaggatttcaaaagttggcattgaaaag
aattctttactgtatgaactcttttctgtaatggtccattcaggaagtgctgctggtggc
cattactatgcctgcataaaatcttttaatgatgagcagtggtatagcttcaatgatcaa
catgtcagcaagataacccaagaagatattaagaaaacatatggtggggcctctggaagc
agaggctattattccagtgcttttgctagctccacaaatgcatatatgcttatatataga
ctgaaggatccgacaagaaatgcaaaatttcttgaagtgaatgaatatccagagcatatt
aagcaattggtacagaaagaaaaagagttagaagagcaagaaaagaagcaacgtgaaatt
gagcgcaatacttgcaagataaaattgttctgcatgcatcctgtgaaacaaataatgatg
gagaataaattagaagttcataaggacaagacactgaaggaagctgtagaaatagcttac
aagataatggatatagaagaagcagttcctctggactgctgtcgtcttgttaaatatgat
gagttccatgattatttggagcgatcatttgaggaggaggaggaggatataccaatggga
ctcttacttggaggagtcaaatcaacatacatgtttgatttacttttggaaacaagaaga
cctgaccagattttccagtgttataaacctggagaggttatggtgaaggttcatgtagta
gacctaaagactgaatctgttgctccttctatcagtgtgcgagcttatttgaatcagaca
gttacagaattcaaggaactcatttcaaaggctgtacgtctgcctgctgaaacgatgcgg
gtagtactggaacgttgctacaatgacttgcgtcttctcagtgtgggcaacaaaacgctg
aaagctgaaggcttttttcgaagtaataaggtattcgttgaaagttcagagtctttggat
cgccagatggcatatacggactcccatttgtggaaacttttggatcgtcatgcaaacaca
atcaggctatatgtttcattgccagaacactctcctgggtctcaatttaaaaggacagtc
aatcaaaaagcgagtggagattcgggcaatttggatgaagcctgtgcaagagtgaaagga
tctctgggtaatatgatatctgtggaggctatcctggaagagagcactgaaaaactcaaa
agcttgtcgttacagcaagagcaggagggggataatggagacagtagcaagagcacagaa
acaagtgactttgaaaacattgaatcacctttgaatgaggtagactctttagcatcagca
gaaaacagagaacttgaaaaccaaactcagatttctgatccagaaaatttccagtcagag
gagcggtcagattctgatgtgaataatgacagaagcacaagttcagtggacagtgatatt
cttagttccagtcacagcagtgacactttgtgcaatgtggacaatgccccgatccccttg
gctaatggacttgactctcatagcatcacaagtagtaggagatctaaagcaaatgaagga
aaaaaagaaacctgggacacagcagaagaagattctggaactgacagtgaatatgacgaa
agtggcaagagtatgggagaagcacaatacatgtacttcaaagcagagccatatgctgca
gatgaaggttcaggagaaggacagaaatggttgctagtgaatgttgataaaagaattacg
ctgtctgccttcaagcaaaacttggagccctttgttggagttctctcctctcacttcaag
gtctttcgagtctatgccagcaatcaagagtttgagagtgttcggctgaatgagacactt
tcatcattttctgatgacaataagataactattagacttggaagagcacttaagaagggg
gaatacagagtcaaagtgtaccagctcttgataaatgagccagaaccatgcaagtttctt
ttagatgctgtttttgctaaaggaatgactgtgcgtcagtcaaaagaggagctacttcct
caactcagggagcaatgtggattagatctgactattgacaggtttcgcctacgaaagaaa
acctggaagaatccaggcactgtatttctggattatcatgtctatgaggaagatattaat
atttcaagcaactgggaggtcttcttagaaatacttgacgaggcagaaaagatgaaatct
atgtcacagcttgctgttctatcaagacgatggaggccatcagagatgaagcttgattcc
ttccaggaagtagttctggaaagcagcagtgttgatgaattaaaagagaagcttagtgaa
ataagtggaatacccttggaatatatagaatttgctaaggggagaggcacatttccttgt
gatatttcagtacttgagatccaccaggacttggactggaatcctaaagtgtctacgttg
aatgtctggcctctctacatttgtgatgatggcgcagtaatattttatagggataaaact
gaagaattaattgaattgacagatgaacagagaaatgaactaatgaaaaaagaaagcagc
agactccagaaaactggacaccgcataacctactcccctcgtaaagaaaaagcactaaaa
atttatctggacggcgccccaaataaagagtcgactcaagactga
DBGET
integrated database retrieval system
