Caretta caretta (Loggerhead turtle): 125641812
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Entry
125641812 CDS
T09292
Symbol
FUBP1
Name
(RefSeq) far upstream element-binding protein 1 isoform X1
KO
K13210
far upstream element-binding protein
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccay03019
]
125641812 (FUBP1)
03041 Spliceosome [BR:
ccay03041
]
125641812 (FUBP1)
Messenger RNA biogenesis [BR:
ccay03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
125641812 (FUBP1)
Spliceosome [BR:
ccay03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
125641812 (FUBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
DUF1897
KhpA-B_KH
Secretin_N
Motif
Other DBs
NCBI-GeneID:
125641812
NCBI-ProteinID:
XP_048718230
EnsemblRapid:
ENSCECG00000016769
LinkDB
All DBs
Position
8:82865214..82907262
Genome browser
AA seq
750 aa
AA seq
DB search
MADYSTVPPPASGAPGGGGGGGGGGVNDAFKDALQRARQVCNVGTSPSVAPTLRLGGLEA
APDRASSDPQRRNLPSTYSGTNRIAAKIGGDGGTSMNSNDYGYGGQKRPLEDGDGSWTSP
SSTTHWEGMPSPFKDQPDAKKVAPQNDSFGTQLPPMHQQQRSVMTEEYKVPDGMVGFIIG
RGGEQISRIQQESGCKIQIAPDSGGLPDRSCMLTGTPESVQSAKRLLDQIVEKGRPTPGF
HHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRI
TGDPYKVQQAKEMVLELIRDQGGFREARNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEM
IKKIQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSVQAGNPGGPGPG
GRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPP
PNADPNMKLFTIRGTPQQIDYARQLIEEKIGGPVNPLGPPVPHGPHGVVPGPHGPPGPPG
PGNPMGPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQPPNPPDPGKPGTDPNSAA
WAAYYAHYYQQQAQPPPAAPPGGPPTTQTNGQGEQPNPAPAGQVDYTKAWEEYYKKMGQQ
GQPQDYSKAWEEYYKKQGQAVPAPAGAPPGQPDYSAAWAEYYRQQAAYYAQTSPQGMPQH
PPAPQCLPRPSTLGSAAKSNSAEDAASTKS
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggcggattattccacggtgccccctcctgcttcgggcgcgcccggaggaggaggagga
ggtggaggtgggggagtcaacgatgcctttaaagacgcactgcagcgggctaggcaggtg
tgtaatgtgggcaccagcccatcggtagctccgaccctcaggctcgggggcctggaagcg
gcccccgatagggcctcctctgatcctcagcgccggaatctcccctctacctattctggg
acaaataggattgcagcgaaaattggaggtgatggaggcacatcaatgaattcaaatgat
tatggttatggaggacaaaaaagacctcttgaggatggagatggctcttggacaagtccg
agcagtacaacacactgggagggaatgccctctccttttaaagatcaaccagatgctaag
aaagttgctcctcagaatgactcttttggaacccagctacccccgatgcatcagcaacaa
aggtctgtaatgacagaggagtacaaagttccagatggaatggttggattcataattggc
agaggaggagaacagatttcacgcatacagcaagaatctggatgcaaaatacagattgct
cctgatagcggtggcctgcctgatagatcttgcatgttaactggaacacccgagtctgtt
cagtctgcaaagagactgcttgatcagatagttgaaaagggaagacctacacctggcttt
catcatggtgatggaccaggaaatgctgtccaagaaattatgattccagctagtaaggca
ggattagttattggaaaaggtggagagaccattaagcaacttcaggaacgagcaggagtc
aaaatggtcatgattcaagatgggccacagaacactggtgcagacaaacctcttaggatt
acaggagacccttacaaagttcaacaagccaaggaaatggtgttggagctgattcgtgat
caaggtggctttagagaggcgcgcaatgaatatgggtcaagaataggaggaaatgaaggg
atagatgtcccaataccacgatttgctgttggtattgtaattggaagaaatggagagatg
atcaaaaagatacagaatgatgctggtgttagaatccagtttaagccagatgatggaaca
actccagatagaatagcccaaattacaggacctccggacagatgtcaacatgctgcagaa
attattacagaccttcttcgaagtgtccaggctggtaatcctggtggtccaggacctggt
ggtcgaggaaggggtagaggccaaggcaactggaacatggggccacctggtggattacag
gaatttaattttattgtacccactggaaaaactggattaatcattggaaaaggtggtgaa
actatcaaaagcataagtcagcaatctggggctagaatagaacttcagagaaatcctcca
ccaaatgcagatcctaacatgaagttgtttactatccgcgggacaccacaacaaattgat
tatgctcggcaacttatagaagaaaagattggaggtccagtaaatcctttgggtccacct
gttcctcatgggccccatggtgttgttcctggcccacatggacctcctggaccaccaggt
cctggcaatcctatgggaccgtataatcctgctccttataatccagggcctcctggtcct
gcacctcatggccctccagccccatatgctccacaagggtggggaaatgcctatccacac
tggcagccaccaaatccaccagatccaggtaaaccaggaacagaccccaattcagcagca
tgggcagcttattatgctcactattatcagcagcaagcacagccgccacctgcagcccct
cctggtggaccacctacgacccaaactaatggacaaggagaacaaccaaatccagcacca
gcagggcaggttgattacaccaaagcttgggaagagtactacaaaaaaatgggtcaacaa
gggcagccacaagattattcaaaggcttgggaggaatattacaagaagcaaggtcaagca
gttccagctccagctggggcccccccaggtcagcctgattatagtgcagcatgggctgaa
tactacagacagcaagcagcatattatgcccagacaagtccacagggaatgccacagcat
cctccagcaccacagtgccttcccagaccttccaccttaggttctgctgcaaaaagcaac
agtgctgaagatgctgcaagcaccaaatcatag
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