Caretta caretta (Loggerhead turtle): 125644339
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Entry
125644339 CDS
T09292
Symbol
RBFOX1
Name
(RefSeq) RNA binding protein fox-1 homolog 1 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccay03041
]
125644339 (RBFOX1)
Spliceosome [BR:
ccay03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
125644339 (RBFOX1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
SPESP1
RRM_5
Motif
Other DBs
NCBI-GeneID:
125644339
NCBI-ProteinID:
XP_048724084
EnsemblRapid:
ENSCECG00000013416
LinkDB
All DBs
Position
10:55615015..58065416
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AA seq
544 aa
AA seq
DB search
MSNPSGSPEDVVKQRGRDGKMRREDLDDSQPEGKRLKLGNEGRNSGKDGAVAEEIMPCLG
REDPAPQAGGEGKSDYKSDNVALASSARNSPQGPVLTTMAVSKVEEITQKPYASGAFSFH
ERSLLSDTKAECSSCVETEDRKISRQQMSCEREQLRGNQEATAPPDTMAQPYASAQFAPP
QNGIPAEYTAPHPHPAPDYTGQTTVPEHTLNMYPPAQTHTEQSAADTNAQTVSGTATQTD
DAAQTDGQQQTQSSENTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNER
GSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKTVNPYTNGWKLNP
VVGAVYSPEFYAGRVLLCQANQEGSPVYSAPSSLVYTSTMPGFPYPAATAAAAYRGAHLR
GRGRTVYNTFRAAAPPPPIPAYGGVVYQDGFYGADIYGGYAAYRYAQPATATAAAYSDSY
GRVYAADPYHHTLAPAATYGVGAVNAFAPLTDAKTRSHADDVGLVLSSLQASIYRGGYSR
FAPY
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatccgtctggcagcccagaggatgtggtgaagcagcgaggcagagatggcaag
atgagaagggaggacctggatgattcccaacccgaggggaagaggttgaagctggggaat
gaaggaagaaacagtgggaaggacggagcagtagcagaagaaatcatgccgtgtttgggg
agagaagatcctgcgccccaagcaggtggtgaaggcaaaagtgactataaatctgacaat
gtggctttggcttccagtgccaggaacagtcctcaaggtccagtattgacaacaatggct
gtcagcaaagttgaggaaatcacacagaagccctatgcaagtggtgccttcagttttcat
gagcgaagccttctttctgatactaaagcagagtgcagttcctgtgtagaaacagaagac
agaaaaatttcgagacaacagatgagttgtgaaagagaacaactaaggggtaatcaggaa
gctacagcacctcctgacacaatggcgcagccttatgcatcagctcagttcgctccacca
cagaatgggatcccggcagaatacacagccccacacccccatccagctccagactacaca
ggccagaccacagttccagagcacacgttaaacatgtaccctcctgctcagacacacact
gaacagagtgcagctgacacaaatgcacaaactgtctccggcacagccacacagacagat
gatgcagcacagactgacggccagcaacagacacaatcctctgaaaacacagaaaacaaa
tcgcagccgaaacggctgcatgtctcaaatatacccttcagatttcgagatccagatctc
agacaaatgtttgggcaatttggtaaaatcttagatgttgaaattatttttaatgagcga
ggctcaaagggatttggtttcgtaactttcgaaaatagtgctgatgcggacagggcgagg
gagaaattacacggcaccgtggtagagggccgtaaaatcgaggtaaataatgcgacagca
cgtgtaatgacaaataaaaagacagtcaacccttatacgaatggctggaaattaaatcca
gttgtcggtgcagtttatagtccagaattctatgcaggcagggtgctgctgtgccaggca
aaccaggagggatctcccgtgtacagtgcccccagttcactagtatacacatccacaatg
ccaggcttcccttaccctgctgcaactgcagctgctgcttacagaggtgcacatctaaga
ggtcgaggtcgtacagtgtacaacacatttcgtgcagcagccccccctccaccaattcca
gcctatggcggtgttgtttaccaggatggattttatggtgcagacatttatggtggttat
gctgcctaccggtatgcccagcctgccactgccactgcagctgcctacagtgacagttac
ggacgagtttatgctgcagacccctaccaccacacacttgctccagcagccacctacggc
gttggtgccgtgaatgcttttgcacccttgactgatgccaagactaggagccatgctgat
gatgtcggtctcgttctttcttcattacaggctagtatataccgagggggatacagccgt
tttgctccatactaa
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integrated database retrieval system
