Ruminiclostridium cellulolyticum: Ccel_0520
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Entry
Ccel_0520 CDS
T00835
Name
(GenBank) peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
cce
Ruminiclostridium cellulolyticum
Pathway
cce00550
Peptidoglycan biosynthesis
cce01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cce00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Ccel_0520
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cce01002
]
Ccel_0520
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cce01011
]
Ccel_0520
Enzymes [BR:
cce01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Ccel_0520
Peptidases and inhibitors [BR:
cce01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
Ccel_0520
Peptidoglycan biosynthesis and degradation proteins [BR:
cce01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
Ccel_0520
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
ACL74902
UniProt:
B8I6L0
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All DBs
Position
complement(598883..600103)
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AA seq
406 aa
AA seq
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MSKKILIVFVALILIFNCLPVFAWTPTEGLTSSSVVLMDTVRGQILFEKNAYAHLSPSVM
CKLMTALVTIEKTDLNAKVTISKNAASFKGLNLVVGNQYTVEDLLYAVMLSQGNDAAVAL
AEYVGDGDIQKFVRYMNTKAKELSLKDTYFVNPTGLYEKDQYTSAKDIAVLVKAAISNNT
FNLMFGARGFGWLNGNNSSILTNQNTLFWSYKGVDGGKIGTNTNPQSISAVTTATLNEKR
LIAVVFNTNEENAFSETAKLFDYGFSKFYTGVLVPKNIPQRSIEVDNVKVDLVSKIDVYY
TYPVGDSFINNISFTPNEKLKLPLNTETIAGVLKYTLNDNTVIEVNLYSDKTVSAPEDYI
SKIKNIVTENRDLVIIVGILAIIELVLIAKNLLKFIFKAKKTRTQK
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaaaaatacttatagtttttgtggctttaatattgatatttaattgtctcccg
gtttttgcatggacgccgacagaaggtcttacttccagctctgtagttttaatggatact
gtaagaggacagattcttttcgaaaaaaatgcttatgcacatttatcaccttcagttatg
tgtaagcttatgactgcccttgttaccattgagaaaactgatttaaatgcaaaggttaca
atcagtaaaaatgccgccagctttaaggggctgaatcttgtggtagggaaccagtatacg
gttgaggatttgctttacgccgtaatgctttcacagggaaacgatgcggctgtggcactt
gccgaatatgtaggtgacggtgatatccaaaaatttgtcagatatatgaatacaaaagct
aaggagctgtcccttaaagatacatattttgtaaatcctactggcctttacgaaaaggat
caatatacatccgccaaggacattgcagtgctggtaaaggcagcgatttctaataatact
tttaatttgatgttcggtgcaagaggttttggttggctcaacggaaataattcttcaatt
ttaactaaccaaaatactcttttttggagctataaaggcgttgacgggggaaaaataggt
accaatacaaaccctcagagtatttctgctgttactacagctaccctcaatgaaaaaaga
cttattgctgtggtatttaatacaaatgaggaaaatgccttttccgagacggcaaaactc
tttgattatgggttctcaaaattttatacaggagttcttgttcctaagaatattcctcaa
agaagtatagaagtggacaatgtaaaggttgatcttgtaagtaaaattgatgtctattat
acctatccagtgggagacagctttattaataatatcagctttacacctaatgaaaagctt
aaacttccgcttaataccgagactattgcaggtgttttgaaatacaccctgaacgataat
accgtaattgaagttaatctgtactccgataagacagtgtcagcacctgaggattacata
tcaaaaattaaaaacattgttactgaaaatcgggatcttgtaataatcgtaggtattctt
gcaattattgaattagttttgatcgctaaaaatcttttaaaattcatatttaaagctaaa
aaaacaagaacccagaaatag
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