Clostridium cellulosi: CCDG5_0969
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Entry
CCDG5_0969 CDS
T03806
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ccel
Clostridium cellulosi
Pathway
ccel03030
DNA replication
ccel03430
Mismatch repair
ccel03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CCDG5_0969 (dnaE)
03430 Mismatch repair
CCDG5_0969 (dnaE)
03440 Homologous recombination
CCDG5_0969 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccel03032
]
CCDG5_0969 (dnaE)
03400 DNA repair and recombination proteins [BR:
ccel03400
]
CCDG5_0969 (dnaE)
Enzymes [BR:
ccel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CCDG5_0969 (dnaE)
DNA replication proteins [BR:
ccel03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CCDG5_0969 (dnaE)
DNA repair and recombination proteins [BR:
ccel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CCDG5_0969 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
CDZ24088
UniProt:
A0A078KNM8
LinkDB
All DBs
Position
I:1061536..1065009
Genome browser
AA seq
1157 aa
AA seq
DB search
MQDFVHLHLHSEYSLLDGACRINGIISRAKELGQKSVAITDHGVMYAAIDFYKLAKKEGI
KPIIGCEVYTAARTRHDRMYHPDSEHGHLVLLCKDMEGYHNLVKLVSTAWIDGFYGKPRV
DWELLTKYNKGLIALSACLSGEIPRLLLANDYEGAKQKALAYNSLFGEGNYYLELQDHGI
PEQKAINPQIVRISRETGIPLVATNDVHYLKKEDAYLQRVLLCIQTNKTVDDPNGVGFPT
EEFYMKSGDEMASLFPEYPEAIENTVKIAEKCNIEFTFGKTILPHFEVPGNQSHYEYFRN
MCIKGLKEKYGENPDEKIVKRLEYELETINRMGYVDYYLIVQDFVRYAKSVGIPVGPGRG
SGAGSLCAYCIGITGIDPIKYNLLFERFLNPERVSMPDFDIDFCYVRRQEVINYVVRKYG
SDHVSQIITFGTMAARAAIRDVGRVMNFSYAETDKVAKLIPSELNITIDKALSMSPELKS
LYDSDERIRKLIDVARGLEGMPRHASMHAAGVVITRDPVDTYVPLQKNDESIVTQYTMTN
LEELGLLKMDFLGLRNLTVIRYAEDMIKEKYQPDFSIDKIPLDDKEVFEMLSLGKTEGVF
QFESAGMKQVLVSLKPESIEDLIAVISLYRPGPMESIPRYIENRHHPEKITYKHPLLKDI
LEVTYGCIVYQEQVMEIVRKLAGYSYGRADLVRRAMAKKKTDVMQKERENFIYGKRREDG
SFECVGAIRNGVSEEIANAIFDEMASFASYAFNKSHAAAYAIVAYQTAYLKCHYPKEYMA
ALLTSILDNTDKVSEYIGECQKLGIGILPPDINESGEGFTVSGNNIRFGLLAVKNLGRGF
IKSLLDERKTNGKFTSFRDFCSRMIGQDMNKRTLESLIKCGAFDSFGYKRRQLLLASSKI
ISQLEEQEKINLSGQVSFFADNNINSEEIPDADEFPRRELLNQEKEVIGFYLTGHPLAEY
KEFINRAGIPHIREVLSDNQRFKDGSKVQLIGIISAKQLKTTKTDSTMAFITLDDGSGQI
ECLVFPKTLETFRNLIAVDEIVVISGRISIREEEAPKILCDSVTKPDLQNLGTAPEKQNS
KNKKAGLYISVPAFECEEYTRAIRVIEVFDGDFPLYVYCRDKKKLLRAPRKLWVSMNDVL
LNELKNILGSSYVQVVN
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgcaggattttgtgcaccttcatttgcacagtgaatatagtcttcttgatggagcctgc
cgcattaacggtataatcagtagagctaaggaacttggtcaaaagtctgtagcgataaca
gatcatggcgtcatgtatgccgctattgatttttataagctggcaaaaaaagagggcata
aaaccaattatcggctgcgaggtatatactgccgcacgtacaaggcatgacaggatgtat
caccccgattctgagcacggacaccttgttttgctctgcaaagacatggagggctatcat
aatcttgtaaaacttgtttctacggcatggatagacggtttttacggcaagccgcgcgta
gactgggagctgttgacgaagtataataagggacttattgcactttctgcgtgcctgtct
ggagaaattccacgacttttgcttgccaacgattatgaaggtgcaaagcaaaaagcactt
gcttacaatagtctgttcggagagggaaattattatcttgaactccaagatcatggcatt
cctgagcaaaaagccataaatcctcagattgtaaggatttcacgcgagacaggcataccg
cttgttgcaacaaacgatgtccactatctaaaaaaagaggacgcataccttcagcgcgtg
cttttatgtatacaaacaaataaaactgtcgatgatcctaacggtgttggtttcccgacc
gaagaattttacatgaaatccggggacgagatggcctcgctttttccggaatatcctgag
gcgatagaaaatacggtaaagattgcagaaaaatgcaatattgagttcacgttcggaaaa
acgatcttgccgcattttgaggtaccgggcaatcagagccattatgaatacttccggaat
atgtgcataaagggccttaaagagaaatatggcgagaatccggatgaaaagattgttaaa
cgattggagtatgagcttgagaccataaaccgcatgggatatgtagattactatctcatt
gtgcaggattttgttcggtatgctaaaagcgtgggaatacctgtcgggcctggcagaggt
tcaggcgcgggtagcctttgcgcttactgtattgggattacaggtatcgacccgataaaa
tacaatttgctttttgagcgcttcctgaatccggaacgcgtcagcatgcctgactttgat
atagatttctgttatgtccgcaggcaggaagtaataaattatgttgtaagaaaatacgga
agcgaccatgtttcgcagataattacgtttggaactatggcagcaagggctgccataagg
gacgtcgggcgcgtcatgaatttttcatatgcagaaacagataaggtcgcaaaactcatt
ccgtccgaacttaacattacaatagataaggcactttcgatgtcgccggaattaaagtca
ttgtatgacagcgacgagcggataaggaaactcatagatgttgcacgtggacttgaaggc
atgccgaggcatgcctctatgcacgctgcgggcgtagttattacaagagacccggttgat
acatatgttccgcttcaaaagaacgatgaatcaatcgttacgcagtacacgatgaccaat
cttgaagagcttggcctactaaaaatggatttcttgggtctgcgcaacctgactgtaata
cgctacgccgaggatatgataaaagagaagtatcagccggatttcagcattgacaaaatt
cctcttgatgacaaagaagtattcgaaatgctttcgcttggcaaaaccgaaggtgtcttt
cagtttgaatcagccggcatgaaacaggtgcttgtcagcttaaaacctgagagcattgaa
gaccttattgccgttatctcgctttatcgcccggggccgatggaatccattccgcggtat
atcgaaaaccggcatcaccccgaaaaaatcacatacaaacatccgctgttaaaagatata
ctcgaagtcacatatggctgcatcgtctatcaggaacaggttatggaaatcgtcagaaaa
cttgccggttattcatatggcagggctgaccttgttcgccgcgcaatggcgaaaaagaag
actgacgtaatgcagaaagaacgggagaattttatctacggaaaacggcgtgaagacggc
agttttgaatgtgtaggcgctatcagaaacggcgtcagtgaagagatagccaatgcgatt
tttgatgaaatggcctcctttgcttcgtacgcattcaataagtcccatgctgcagcatat
gctattgtggcttatcaaacagcctatctaaaatgccattatcctaaagaatatatggct
gccctcttgacgagcattcttgacaacacagacaaggtttcagaatatatcggagaatgt
caaaagctcggcattggaatactcccaccggatataaatgagagtggggaaggctttaca
gtaagcggcaataacatacgttttggactgcttgcagttaagaacttagggcgcggattt
attaagtcactgcttgacgaaagaaagacaaacggaaaatttacttccttccgagatttc
tgttccagaatgatagggcaggatatgaataagcgtacccttgaaagcctgattaaatgc
ggagcatttgatagtttcgggtataaaagaaggcaactgttgcttgcttccagtaagata
atctcccagcttgaagaacaggaaaagatcaatctttctggacaagtaagtttctttgcc
gataataatattaattccgaggaaataccggacgcggatgaattcccacgccgcgaactc
ttaaatcaagaaaaagaagtaatcggattttacctcacaggacatcctcttgctgaatat
aaagagtttataaatcgtgccggaataccgcatatcagggaagtattaagcgacaaccaa
cgctttaaagacggctcaaaagttcaactgataggtataatttcagccaaacaattgaag
actacaaaaacagatagtacaatggcctttataacactcgacgatggaagcggacagata
gaatgtctggtatttcctaaaacacttgaaacattcagaaacttaatagctgttgatgag
attgtagttatttccggacgcattagtatccgggaagaggaagcaccgaaaattttatgt
gactctgtgacaaagcctgatttacagaatttagggactgctccagagaagcaaaacagt
aaaaataaaaaagccgggctttatataagtgtgccggcttttgaatgtgaagagtatacc
agagctataagggtaattgaagtgtttgacggcgatttcccgctctatgtttactgccgt
gacaaaaagaaattattacgtgctccgagaaaactttgggtttcaatgaatgatgtcctt
ttgaatgaattaaaaaatattttaggcagctcctacgtccaagtagtaaattaa
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