Chlorobium chlorochromatii: Cag_0603
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Entry
Cag_0603 CDS
T00290
Name
(GenBank) exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cch
Chlorobium chlorochromatii
Pathway
cch03410
Base excision repair
cch03430
Mismatch repair
cch03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Cag_0603
03430 Mismatch repair
Cag_0603
03440 Homologous recombination
Cag_0603
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cch03400
]
Cag_0603
DNA repair and recombination proteins [BR:
cch03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Cag_0603
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Cag_0603
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Cag_0603
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ABB27876
UniProt:
Q3ASZ9
LinkDB
All DBs
Position
706047..707753
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AA seq
568 aa
AA seq
DB search
MKRYRWKCFMPHEETVAALSESINVSQPIARALCNRGISTYNEAKEFFRPVLSTLHSPWL
FNDMERAVERLVRALKNGETILLYGDYDVDGTTGVALLLLFLRHHGVEPLWHINDRFAEG
YGLSPEGIDRVIASGTTLLITVDCGIKDHAAIRRCGEHGVEVIVCDHHEADVTPEAYAIL
NPKVVGSGYPFRELCGCAVAFKLVQALAERLGDSEAVWHQFLDLVAVATAADLVSLTGEN
RTLVIEGLQQMRSKPRKNFSEMFRVMKVSLGDVRMFHLAFGIAPRINAAGRMHSAHLALE
WLLASAPDAVEQHTEALERVNVQRRSLDSTIMSQADKMVESHCASYCSSIVLYDEAWHLG
VLGIVASKLIDKYYLPTVVLGGMNGLVRGSVRSIEGLNIHAVLQHCSHHLEQFGGHHQAA
GLTLKPENLAVFRKAFDEQCANQLTIEQRQKVMEIDAVVELEQITDKFIAVLEQFAPYGI
GNREPLFMSERLQLAEPARLLKERHVKFAVRDKQKRRFEVIGFNRPDIYNDLRAVKHPTI
TMLYTIERRQWNGMWQVQLLLKDLEVQR
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgatatcgttggaagtgcttcatgccacatgaggaaacagttgcggcattatcg
gagtccattaatgtgtcgcagcctattgcgcgtgcgttgtgtaatcgtggcatttccact
tacaacgaggctaaagagttttttcgtcctgtgctttccacccttcactctccatggctt
tttaacgatatggagcgtgcggtagagcgtttggttcgtgctcttaaaaatggtgaaacc
attttgttgtatggcgattacgatgttgatggcactacgggcgtagcgcttttgctgctc
tttttgcgccatcacggcgttgagccgttgtggcatattaatgatcgttttgcggaaggg
tacggtttatcgcccgaaggaattgatcgagttattgcaagcggtacaaccttgctgata
acggtggattgcggtattaaagatcatgcggctattcggcgttgcggggagcatggcgtt
gaggtgattgtgtgcgatcaccacgaagccgatgttacgcctgaagcctatgctatttta
aatcctaaagtggttggttcgggctatccttttcgtgaactgtgcgggtgtgcggtggcg
tttaagttggtgcaagcgcttgctgagcgtttgggtgatagtgaggcggtgtggcatcaa
tttcttgatttagttgccgttgcaacggcggcggatttggtgtcgctcacgggcgaaaat
cgcacgttggtgattgaagggttgcagcaaatgcgctctaagccacgcaaaaattttagc
gaaatgtttcgggttatgaaggtttcgcttggcgatgttcggatgtttcatcttgctttt
ggcattgcgccgcgcattaatgcggctggaagaatgcactcggcgcatcttgcgcttgag
tggctgctggcaagtgcgcccgatgcggtggagcagcacacggaggcgcttgagcgggtg
aatgtgcagcgccgttcgcttgatagcaccattatgtcgcaagctgataagatggttgaa
agccattgtgcctcctactgctcttccattgtgctctacgatgaggcgtggcatcttggg
gtgttgggcattgtggcatctaaacttattgataaatattatttgccaacggttgtgttg
gggggaatgaatggcttggttcgaggttcggtacgaagcattgaagggttgaatattcat
gcggtgcttcagcactgtagccaccatcttgagcaatttggtggacaccatcaagcggcg
ggtttaacgctcaagcctgaaaatctggcggtatttcgcaaagcttttgacgagcagtgt
gccaatcagcttaccattgagcagcgccaaaaggtgatggaaattgatgcagtggttgag
cttgagcagattaccgacaaatttattgcggtgttggaacaatttgccccttacggcatt
ggcaaccgtgaaccactttttatgagtgaacggctgcaacttgctgagcctgctcgactt
ttaaaagagcgccatgtaaagtttgctgtgcgcgataagcaaaagcgccgttttgaggtg
ataggctttaaccgccccgatatttataatgatttacgagctgtaaagcatccaacgatt
accatgctttacactattgagcgccgccaatggaatggcatgtggcaagtgcaactctta
ttgaaggatttggaggtgcagcgctaa
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