Cellulomonas chengniuliangii: NP064_04790
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Entry
NP064_04790 CDS
T09092
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cche
Cellulomonas chengniuliangii
Pathway
cche03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cche00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NP064_04790 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cche03021
]
NP064_04790 (rho)
03019 Messenger RNA biogenesis [BR:
cche03019
]
NP064_04790 (rho)
Transcription machinery [BR:
cche03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
NP064_04790 (rho)
Messenger RNA biogenesis [BR:
cche03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NP064_04790 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
AAA_25
NACHT
ResIII
Motif
Other DBs
NCBI-ProteinID:
UUI76222
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All DBs
Position
1017827..1019896
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AA seq
689 aa
AA seq
DB search
MTDTIQAAGSKSSDAPSTTGAISALRLPQLQALAAELGVTGTSKMRKSDLVEAIKAKRGG
SAPTSARRAETAAEAPVIPDVRVDVEPKRAPRSTDDAPVRRPDIAAELQAVERTLDQRHA
ASETRDDRAARAADAVGSVTGERRSRRSGRGAGAPRGDAAEQAVDAALRHEPAEQADDSP
RGERSEQSGHRDGGQRQQRDGQQRDAQRDGQQRDGQQRDGQQRDGQQRDGGQQRDGGQQR
EGAGQNAQRDHAGHEDDERGGRRRRSRDRYRDRDRTKGRSRGGRVAGGDVAGYEEVEVSA
DDVLLPVAGILDILDSYAFVRTSGYLPGANDVYVSLGQVKKAGLRRGDAITGAVRQPRDG
DPQPQGNSARSKFNALVRLDSINGMSPEEARQRPEFSKLTPLYPQERLRLEHDPSQVTPR
VIDIVAPIGKGQRGLIVSPPKAGKTIIMQQIANAITTNNPEVHLMVVLVDERPEEVTDME
RTVKGEVIASTFDRPASDHTIVAELAIERAKRLVELGQDVVVLLDSLTRLSRAYNLAAPA
SGRILSGGVDASALYPPKRFFGAARNIEHGGSLTILASALVETGSKMDEVIFEEFKGTGN
MELRLTRSLADKRIFPAVDVNASGTRREEILMSPDELKIVWKLRRVMGALDQQQAIELLL
GKLRDTKSNVEFLLQVQKTTPGTGGPTDT
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
gtgactgacaccatccaggccgccgggagcaagagctccgacgcgccgagcaccaccgga
gcgatctccgcgctgcgtcttccgcagctccaggccctcgccgccgagctcggggtgacg
ggcacgtcgaagatgcgcaagagcgacctcgtggaggccatcaaggccaagcggggaggc
tccgcgcccacgtccgcccgtcgtgccgagaccgccgcggaggcgccggtcatcccggac
gtccgcgtggacgtcgagccgaagcgcgcgccccgctccaccgacgacgcccccgtgcgc
cgccccgacatcgccgccgagctgcaggccgtcgagcggacgctcgaccagcgccacgcc
gcgagcgagacccgcgacgaccgcgccgcccgtgcggccgacgcggtcggctccgtcacc
ggggagcgtcgctcccgtcgctccggccgtggagccggcgcgccccgcggtgacgccgcc
gagcaggccgtcgacgccgccctccggcacgagcccgccgagcaggcggacgactccccg
cgcggcgagcgctccgagcagtccgggcaccgcgacggcggccagcgccagcagcgtgac
gggcagcagcgggacgcccagcgtgacggccagcagcgtgacggtcagcagcgcgacggc
cagcagcgcgacggccagcagcgtgacggcggccagcagcgtgacggcggccagcagcgt
gagggcgcgggccagaacgcgcagcgcgaccacgccgggcacgaggacgacgagcgcggc
ggtcgccgccgccgctcgcgtgaccgctaccgcgaccgcgaccgcaccaagggccgctcg
cgcggcgggcgcgtcgccggcggagacgtcgccggctacgaagaggtcgaggtcagcgcc
gacgacgtgctgctgcccgtcgcgggcatcctcgacatcctcgacagctacgcgttcgtg
cgcaccagcggctacctgccgggcgcgaacgacgtgtacgtctcgctgggccaggtcaag
aaggccgggctgcgccgcggtgacgcgatcaccggcgccgtccgccagccgcgcgatggc
gacccgcagccgcagggcaacagcgcccgatcgaagttcaacgcgctggtccggttggac
tccatcaatggcatgtctcccgaggaggcgcgccagcgccccgagttctcgaagctcaca
ccgctgtacccgcaggagcgcctgcgcctcgagcacgacccgagccaggtcaccccgcgc
gtcatcgacatcgtcgcgccgatcggcaagggccagcgtggactgatcgtgtcgccgccg
aaggctggcaagacgatcatcatgcagcagatcgccaacgccatcacgaccaacaaccct
gaggtccacctcatggtggtgctcgtggacgagcggcctgaagaggtcaccgacatggag
cggacggtcaagggcgaggtcatcgcctcgacgttcgaccgccccgcctcggaccacacg
atcgtcgccgagctcgcgatcgagcgcgccaagcgcctggtcgagctgggccaggacgtc
gtcgtgctgctcgactcgctgacccggctgtcgcgggcctacaacctcgcggcccccgcc
tcgggccggatcctctcgggtggtgtcgacgcctcggcgctgtacccgcccaagcggttc
ttcggcgccgcgcgcaacatcgagcacggcgggtcgctcacgatcctcgcctcggcgctc
gtggagaccgggtccaagatggacgaggtcatcttcgaggagttcaagggcaccgggaac
atggagctccggctcacccgctcgctcgcggacaagcgcatcttcccggcggtcgacgtc
aacgcctcgggcacgcgccgcgaggagatcctcatgtcgcccgacgagctcaagatcgtc
tggaagctccgtcgcgtcatgggcgccctcgaccagcagcaggccatcgagctgctgctc
ggcaagctgcgcgacaccaagtcgaacgtcgagttcctgctgcaggtgcagaagaccacg
cccggcacgggcggcccgaccgacacgtga
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