Cohnella cholangitidis: FPL14_24220
Help
Entry
FPL14_24220 CDS
T07708
Name
(GenBank) alpha amylase
Organism
cchl
Cohnella cholangitidis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_25
Alpha-amylase
fn3
RGI_lyase
CBM_20
Big_7
AMPK1_CBM
CBM53
Motif
Other DBs
NCBI-ProteinID:
QMV45159
UniProt:
A0A7G5C7H5
LinkDB
All DBs
Position
5289189..5292566
Genome browser
AA seq
1125 aa
AA seq
DB search
MIRRWFSPLLIAALLLSVCANVFIASPKTVHAASIGTVDENDTIYQIMVDRFHDGDPSNN
ATGSAIRYGETSEEDFRHMKGGDWQGVIDKLGYIKNMGYTAIWISPVAEPQMTNRENNGS
GRNTAYHGYNVKDPNKANPFFGTKEKLKELVDSAHALGIKVVIDVVPNHVGDYMLGTQAF
YDIPSLQPAAPFNNPAWYHHNGDINFGSVDGVYTQAAQDYLENHDLGGLDDIDFDVPAAR
QAMFDSIKGWFDYTGADGARVDAAKLMKPTDIGALQNYLGVNTFGENFDGNAEFVSRWVG
ANKEWGMLDFPLFFQVLNSFAYGQSFDANVKAALDQDYRYNGNENHMVTFIDNHDRNRFL
QVAGGDVQKLQNALSFIFTVRGLPVVFQGTEQNKGNGNNQVLSDGIADTWNRWSMVKRDA
NGNVIQDYFNENTNTYQHVAKLNQIRKKYEALRKGKQREMWSAQNLYAFSRRVDSGTNVG
QEVVSVFSNASGGTQTVTIPLRAESTMTVGTILVNQLNTSDTVTVQSGGVTGKQITVSIG
GNSAKIYAKEITDTQAPTVPTNVSANAVSSTSVQVTWTASADNIGVTGYEVYRNGSLVGT
TAGTSYTDNGLTASTTYSYTVKAYDAANNKSALSSPPASATTNPIDTQAPTVPQNVTATA
VSSSSINVAWTASTDNIGVTGYEVFRNGTLVGQTATASFTDVGLAATTAYAYTVKALDAA
SNRSAASSPPAEATTLAGNNVTIYYKQGFTTPYIHYRPAGGTWTTSPGVAIPASEVPGYN
KITINIGTASQLEACFNNGSGTWDSNNQQNYLFGVGTWTYTPTGNIVSGAPALPENEPPS
VPQNVAATALSATSASVTWNASTDNVGVTGYEVFRNGTLVGTSTTTSFTSTGLAAATTYT
FTVKAYDAAGNRSAESSPPASVTTPAGNQATIYYKNTAFTNSYIHYKLDNSSTWTTLPGS
QMQSSTYPGYASITIELGSATGLTAAFNNGSGTWDNNGGNNYTFASGTWSLVNGNKTSGT
PQADSVTFRVTVPASTPANGPVYLAGSFNSWNTADSAYQLTKGTDGVYSITLSLPAGTAV
QYKLTRGTWASVEANSNGSDISNRTLTPSGGAQTVNVTVQRWKDQ
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgattagaagatggttttctccgttactcatcgccgctcttttgttgtccgtttgcgca
aacgttttcatcgcatctcctaagacggttcatgcggcaagtatcggaacagtggacgag
aacgatacgatctaccagatcatggtcgaccggtttcacgatggcgatcctagcaacaac
gcgacgggatcggccattcgttacggcgagacctcggaggaagatttccgccatatgaaa
ggcggagactggcaaggcgtcatcgataagctgggctatattaaaaatatgggctacacg
gctatctggatttcgcccgttgccgagcctcaaatgacgaatcgcgaaaataacgggtcg
ggcagaaacaccgcttatcacggttacaacgtcaaggatccgaacaaggcgaatcccttt
ttcggaacgaaggaaaagctgaaagaactcgtagactcggcgcatgcgctcggaatcaaa
gtcgtgatcgacgtcgttccgaatcacgtcggagactatatgctgggtacgcaggcattt
tacgatattccgagcttgcagcctgccgcgccgtttaacaacccggcttggtatcatcac
aatggggatatcaatttcggttctgtcgatggcgtctacactcaagcggcgcaagattac
cttgagaatcatgacctaggcggactggacgacatcgacttcgacgttccggccgcaagg
caagcgatgttcgattcgatcaaaggctggttcgattacacgggagcggacggagctcgc
gtagatgcggctaagctaatgaagccgacggatatcggagcgctgcaaaattatctaggc
gtcaatacgttcggggagaacttcgacggcaacgccgaattcgtctcgcgctgggtaggc
gcgaacaaagaatggggaatgctggacttcccgttattcttccaagtgcttaatagcttc
gcatacggccagtcgttcgatgcgaacgtcaaagctgccttagaccaggattatcgctat
aacggcaacgagaatcatatggttacgttcatcgataaccatgaccgtaaccggttcctc
caagtagccggcggcgacgtgcagaagctgcaaaacgcgttgtcgttcatctttaccgtc
cgcggtttgccggtcgtattccaagggaccgagcaaaacaaagggaacggcaacaaccaa
gttctgagcgacggaatcgcggatacgtggaaccgttggtcgatggtcaaacgcgacgcg
aacggcaacgtcattcaggactattttaacgagaacacgaacacttaccagcacgtcgcc
aagctgaaccaaattcgcaagaagtacgaagcgctccgcaaagggaaacaacgcgaaatg
tggtccgctcaaaatctgtacgccttctcccgccgcgtagatagcggcacgaacgtcgga
caagaggtcgtatcggtattcagcaacgcttcgggcggcacgcaaaccgtgacgattccg
cttcgggcggaaagcacgatgacggtcggaacgatattggtcaaccagttgaacacgtcc
gataccgttaccgtgcaatccggcggagtaacgggcaagcagattacggttagcatcgga
ggaaactccgcgaaaatctatgccaaggagataaccgatacgcaagcgccgacggttcca
acgaacgtaagcgccaacgcggttagctcgactagcgttcaagtgacgtggacggcttcc
gcggataacatcggcgtgacgggatatgaagtataccgcaacggttcgctcgtcggaacg
acggcgggaacttcttacacggacaacggtttaacggcttcaacgacttattcgtacacc
gttaaagcatacgacgcggccaataataaatccgcgttaagttcgccgccggcttcggcg
acgacgaatccgatcgatacgcaagcccctaccgtaccgcagaacgtaacggcaaccgcc
gtgtcgtcctcgtcgatcaacgtcgcatggacggcttctacggataacattggcgttacg
ggatacgaagtgttccggaacggcacgcttgtcggccaaaccgcgaccgcatcgttcacg
gatgtaggattggcggcaacgaccgcatacgcttatacggtcaaagctctcgatgcggcg
tccaaccgttcggcagccagctcgcctccggcggaagctacgacgcttgccggcaataac
gtgacgatctactacaagcaaggattcacgacgccttatatccattaccgacctgcaggc
ggtacttggacgacttctccgggcgtcgccattccggcatccgaagtgcccggatataac
aagattacgatcaacatcggcaccgcaagccagcttgaagcttgcttcaataacggaagc
ggaacatgggatagcaacaaccagcagaactacctcttcggagtaggaacttggacgtat
accccgacgggcaatatcgtgtcgggagctccggctcttccggagaacgagccgccttct
gttcctcagaacgtagcggcgaccgctctttcggctacttcggcaagcgtcacctggaac
gcttctaccgacaatgtcggagttaccggttacgaggtgttccggaacggtacgctagtc
ggaacgtcaacgacgacgtcctttacgagcacgggattggcagcagctactacctatacc
tttacggtgaaagcttacgatgcggccggcaatcgctccgcggagagctcgcctccggca
tcggtcacgactccggccggcaaccaagcgacgatctattacaaaaatacggcttttacg
aactcttacattcattataagctcgacaattcgtcgacttggacgacgttgccgggaagc
cagatgcaaagctctacgtatccgggatatgcaagcatcacgatcgagcttggcagcgct
acgggtttaaccgcagccttcaataacggcagcggaacctgggacaataacggaggcaat
aattatacgttcgcttcgggaacttggagcttagtgaacggcaacaaaacttccggaacg
cctcaagcggacagcgtaacgttcagggttacagtgccggcttcaacgcctgcgaacggc
ccagtctatttagcgggctcgttcaacagctggaataccgcggattccgcttatcagttg
acgaaaggaacggacggcgtctattctattacgcttagcttgccggccgggaccgcagtc
caatataaactgacgcggggaacgtgggcttcggtagaggcgaactcgaacggcagcgat
atttccaaccgcacgttgactccgtcagggggcgcgcaaacggttaatgtaacggtacag
cgctggaaagatcaataa
DBGET
integrated database retrieval system
