Corynebacterium choanae: CCHOA_04060
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Entry
CCHOA_04060 CDS
T06925
Symbol
lsrB
Name
(GenBank) Autoinducer 2-binding protein LsrB precursor
KO
K10559
rhamnose transport system substrate-binding protein
Organism
ccho
Corynebacterium choanae
Pathway
ccho02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ccho00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CCHOA_04060 (lsrB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccho02000
]
CCHOA_04060 (lsrB)
Transporters [BR:
ccho02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
CCHOA_04060 (lsrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Motif
Other DBs
NCBI-ProteinID:
AZA13221
UniProt:
A0A3G6J552
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All DBs
Position
1017341..1018363
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AA seq
340 aa
AA seq
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MLRKTAAALACVGLLTGMTACAGGNGGNTAADGDTTATGDMKVAFVPKIQGIPFFEAMNT
GGQQAAKDFGFTWIYSGPTTADPAAQSDVVRSLMQQRVNALMVAPNDPDSIAPLMKEAAD
KGIRVGTTDTDATSSVREVFVNQATAEGIGGALLDEVAKPIDGKGKIAIVSCGQTAANLN
SWIDVIKKKQKSDYPDIDIVDVVYADEDQPKAVTMAKNLMNANPDLKGLIGPCTTAAPGI
AQAVQETGNIGKVFTVGVGTPQAMLPYLKDGSSTASVLWDVNNQGYLTAWAGWMLAKGEQ
FQPTQDVGPIKGVTYNDADKTLLMGDPLILTADNAGNYNY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgcaaaactgcagccgctttggcctgcgtcgggttgctgacaggcatgactgcc
tgtgctggcggcaacggtggaaacaccgctgccgatggcgacaccacggccaccggcgac
atgaaagtagcgttcgtgccaaagatccaagggatcccgttcttcgaagcgatgaacact
ggtggtcaacaggccgcaaaagacttcggtttcacctggatctacagtggcccgaccact
gctgacccggccgcccaaagtgatgtggttcgttcactgatgcagcagcgggtcaatgca
ctgatggtcgcccctaacgacccggactcgatcgcgccgctgatgaaagaagctgcggac
aaaggaattcgagttggtacaacggacaccgacgcaacaagtagcgtgcgtgaagtgttc
gtgaaccaagccaccgccgaagggattggtggggcactgctcgacgaggttgcgaaaccg
attgacgggaaaggcaaaattgccatcgtttcctgcggtcagactgccgcgaatctgaat
tcctggattgatgtcatcaaaaagaagcagaagagcgactatcccgatattgacattgtc
gatgtggtttatgccgatgaagatcagcccaaagctgtgacgatggcaaagaatttgatg
aatgctaatcctgatctcaaagggctaatcgggccgtgcactaccgctgccccggggatc
gcccaagccgtacaagaaaccggaaacatcgggaaagtattcactgtcggcgttggtacc
ccacaggcaatgctgccatatctcaaagacgggtcatcgacagcttccgtgctgtgggat
gtcaacaaccagggctatctcactgcttgggcaggatggatgctggccaagggtgagcaa
ttccagccgacccaggacgtagggccaatcaagggagtcacctacaacgatgcagataaa
accctgctcatgggtgatccacttatcctcaccgctgataacgccggtaactataactac
taa
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