Coprinopsis cinerea: CC1G_05170
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Entry
CC1G_05170 CDS
T01275
Name
(RefSeq) hypothetical protein
KO
K18721
nucleoporin NUP1
Organism
cci
Coprinopsis cinerea
Pathway
cci03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cci00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CC1G_05170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cci03019
]
CC1G_05170
Messenger RNA biogenesis [BR:
cci03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CC1G_05170
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_FG
bMG5
Motif
Other DBs
NCBI-GeneID:
6009966
NCBI-ProteinID:
XP_001833470
UniProt:
A8NG43
LinkDB
All DBs
Position
2
AA seq
1222 aa
AA seq
DB search
MASTTNQPSKITRQGSLLGTIKNIVAAPLTWLAGSEHDDSSDSTGKRRRLEPVSESGTTD
DGDNATRTKRMRLNSPPKTVAPTAYNDPPSSAFVPLRVKRRTPAPPLARSSSTSANILEP
PRNSRRNVSRSTLSPPRIGRTMSMDPPLSQLYISRDASIPDVVMESGQASNTRELSVPAG
SLTARPSFRMRTSLTPQPQPRELSEPPPISTLSLNPTFVRPPRPIQEEPKPSTTLGTLVE
SVRSARSPGRQHSSLLFGNTVQPDANHQPAPAPQAPAEKALYELDVYKTPLIPTRLRSAN
NPIASSSSDIPSMFKSRRTSQLVLMHDDRRSEKSGKKKRVKSPHRNDAKPYAGSGGMKKL
LAKRKKEEDDADVREREAGTKDEDMEKESKPEVAPQPAQTSNAPTDWFAAATAGTSLPSS
SLRVGRTKTSRNHIPRPAARSRLKFSAVYEEEDDSMDPEEEARRKERAALEEAANKMPVF
NIPAGFTFAKPDTKPLEQDLTNAKEPPISSLPFSFAKPAPVPEPSKAESSQSRKENAEGS
TLSSERPAEPSTVPSFAPRSLADAPPLGSSEPTKEPPTTPAGVPNFFAKSALLSKPLEVP
STPPLTFGTPSSSSTSVFNVAQSSSQAPGPVKDKENPFWEGDSKKESAAPEIQVTPPTTS
GFSFGAPATTQPAAATAFSFAKPEATATTGGFSFGKQTETAAAAPTTAETPSAPAVEPSK
PLFGTQPPAPTTQQSQPPSSEAKPESSSVPNFFGSTASKPFDGFKSQEPAAPPASTSFSF
GSSAASSTTASSTSAEPAKPLFGTSAADPPKPLFGATSTEPPKPLFGATAPAEPPKSLFG
GAPAEAPKPLFGSGALEAPKPTLPSSSSSPFSFGAPAKDTAPKASPFTFGAAPSTPPTHP
TTNGFSFKTDAPAASPSPVPFTFGSSAPSPAPAADKPFTFGAPAAAPPIQRPTTPKNNEQ
EFRMEESPTREMQANGASKPTLSFSFGQSANGSSTLFGGSTSGAPSPAPTSATPFSFGAT
TASNPFASSAKPEEPKPFSFGTPASTPTTTASPFSFGPSKSTGGEPARPNTTGSFSFGAT
STPTSTAAPFSFGTGAAAAPNPFAPSQPTSAPSSPSTFNQPSPFSFAAPLPATSSSTPFT
FGSQPASPAGSNSGLPATGGFGTATNGAFGATAAPSSPFNPPAQLAPSTSSGGTLFTIGA
APAPAAGRQIKKLPTRRAGAKR
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaccaccaaccagccatcgaagattacccggcaaggctcgttgctggggacc
atcaagaatatcgtagccgcccctttaacttggctggccggctcagaacacgacgacagc
tcggactccacaggcaagcgcaggcggcttgaacccgtctcagagtccggcactacagac
gatggcgataatgcgacacgtacgaagcgcatgaggctcaacagtccgcccaagacggtc
gcaccaacggcatataatgatcccccttcgtctgctttcgtcccccttcgtgtgaagcgc
agaacccctgcaccaccactcgctcgttcttcctcgacttcagcaaatatcttagagcca
ccccgtaattccaggcgcaatgtttcgcgatcgacactgtcgcctcctcgcattggtcgc
accatgtcgatggacccgcctttgagccagctttatatctccagagatgcctctatccct
gacgtggtcatggaatccggccaagcatccaacactcgtgagctctctgtccccgcagga
tcgcttactgcacgtccgtccttccgcatgcgaacctccctcaccccccaaccgcaaccc
cgtgagctgtctgagcccccgccaataagcactctctctttgaatcctacctttgtccgc
ccgcctcgcccgattcaggaggaaccgaaaccatcgacgacgcttggaacattggtcgaa
tcagtgagatctgcgcgatctcctggcaggcaacatagctcactcctctttgggaacact
gttcagccagacgctaatcatcagccagctccggctcctcaagctccggcagagaaggca
ctgtatgaattagatgtctacaaaacgcctcttattcctactcgtctccgctcagccaac
aacccgatcgcctccagctcctcggatatcccatcgatgttcaagtctcgacgcacttct
cagctcgttctcatgcatgacgatcgtcgatctgaaaaatctggcaagaagaagcgggtc
aagtcccctcatcgtaatgatgctaaaccttacgctggctctggtgggatgaagaaatta
ctggctaagaggaagaaagaggaagacgacgcagacgtccgagaaagggaagctgggacc
aaggatgaggatatggagaaggagtcgaagccggaagtcgcaccgcagccggcgcagacc
tccaacgcaccgaccgattggttcgctgcagccactgccggcacctctttgccatcgtca
tctcttcgtgttggtcgtactaagacttcgcggaaccacattcctcgcccagctgcccgg
agccgcctcaagttctccgctgtttacgaagaggaggatgattctatggatccggaagag
gaagccaggagaaaggagcgtgctgccctcgaagaagcagccaataagatgcccgtcttc
aacatccctgccgggttcacttttgcgaagcctgatactaagcctcttgagcaagacttg
accaatgccaaggaacctccgattagttctctgcctttctcctttgccaagcctgcccca
gtccccgaaccctccaaagcagagagttcacaatctcgcaaggagaatgccgagggttcg
acactctcctcagaacgaccggcggaaccgtcaacggtgccttcatttgcacctcgttcc
ttggctgatgccccacctctgggatccagtgaaccgaccaaagaaccaccgacaacaccc
gccggagtgcccaatttctttgcaaaatctgccctcttgtctaagccactcgaggttccc
tcgacgcctcctctcacctttggtacaccctcttcaagttccacgtctgtctttaatgtt
gcacaatcttcaagtcaggctccaggtccggtgaaagacaaagaaaaccccttctgggaa
ggcgacagcaagaaggagagcgcagctcctgaaatccaggtcacaccgccgactacctca
ggtttctcgttcggggcacctgctaccactcaaccagcagcggcgacagcgttctccttt
gcgaaacctgaagctaccgctactaccggaggattttccttcggcaagcaaacggagacc
gcggcagccgcgccaaccacggccgagaccccgtctgccccggcagtagagccatccaaa
ccgcttttcggcacgcagcctccggcaccaacgacacagcaatcacagccgccatccagt
gaggcgaagccagaatcttcttcagtacccaacttctttggttctactgcctccaagccg
ttcgacggtttcaagtcacaggagccggctgcgccaccggcatcgacgtcgttctctttt
ggctcctctgcagcatcgtctacaacagcctcgtccacttccgctgagccggccaagccg
ttatttgggacttctgcggctgaccctcctaagcctctgtttggcgcgacctccaccgaa
ccgcctaagccactgttcggtgccaccgcgcccgctgaaccgcccaagtccttgtttggg
ggtgcacccgccgaagctcccaaacctttgttcggaagcggcgctctcgaggcacccaaa
ccgaccctcccatcatcgagctcgagtccgttctcatttggtgcgcctgcgaaggataca
gcgccaaaggcttctcccttcacctttggggctgctcccagcaccccgcccacccatccg
actaccaatgggttctcattcaaaaccgatgcaccagcagcgtcgccttcgccggttccg
tttacgtttggttcttcagctcccagcccagccccagctgcggacaagccattcacattc
ggcgcacctgcggctgcaccgcccatccagcgtcctacaacgccaaagaataacgaacaa
gagttcaggatggaagagagtcccacgcgtgaaatgcaagctaacggagcttccaagcca
acattgagcttctcatttggtcagtcagccaacggatcatctactctgtttggtggctcc
acgtctggagcaccttctcccgccccaacgtcggctacaccattctcttttggcgctaca
accgcctcgaatcccttcgcatcctctgcgaaaccagaggagcccaaaccattctcgttt
ggaacacctgccagtaccccaacgaccaccgcttctcccttcagttttgggccgtccaaa
tctacgggtggtgagcccgcgcgacccaacacgacagggtctttcagttttggagcaacg
agcactcccacttcgacagctgcgcccttctcctttggaaccggtgctgcagccgctccg
aatccttttgcaccatctcaaccgacctccgccccgagcagtccttcgaccttcaaccaa
ccctctccattctcctttgcggcacctctccctgcgacatcctcttctacaccattcacc
tttggctcgcagcctgcttcccctgccgggtctaacagtggattgcctgcaactggtggg
ttcgggacagccacgaacggagcctttggggctaccgcggcaccctcgtctcctttcaac
cctcccgctcaattggcaccctcgacatcgtccggtggcacactgttcaccattggagct
gcacctgctcctgccgctggtcgtcagatcaaaaagctgcctacccgaagggctggagcc
aagcgttaa
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integrated database retrieval system
