Coprinopsis cinerea: CC1G_10045
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Entry
CC1G_10045 CDS
T01275
Name
(RefSeq) transcription factor TFIIH complex subunit Tfb2
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
cci
Coprinopsis cinerea
Pathway
cci03022
Basal transcription factors
cci03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cci00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CC1G_10045
09124 Replication and repair
03420 Nucleotide excision repair
CC1G_10045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cci03021
]
CC1G_10045
03400 DNA repair and recombination proteins [BR:
cci03400
]
CC1G_10045
Transcription machinery [BR:
cci03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CC1G_10045
DNA repair and recombination proteins [BR:
cci03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CC1G_10045
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
6013097
NCBI-ProteinID:
XP_001836551
UniProt:
A8NUW8
LinkDB
All DBs
Position
4
AA seq
403 aa
AA seq
DB search
MRGHRLYDEALATLSRLHILPTATGKLALNSTFKSGFRQAITGGGSSGSFGVPAVDHEKK
DDGRIPPDREDKRGPPSIAALDAYALERWETILHYMVSSGSGQRPTEPSPGVRFLLKTSG
LMNEIHDALHISSAGFQFLLHSPHEQLWHLLLQYLQLAEQRRMDLVDVLSFFFMLSTMEL
GREYSVQNLTKTQSAMLEDLRDYGLIWQRKQTSKRFSPTRLSTTLTSSSPPLPSTSGASS
GPQEGFIILETNYRIYAYTDNPLQTAVLSLFASLKYRFPNLVVGSITRESVKKALLNGIS
ADQIISYLITHAHPNMRKNNPLLPVTVQDQIRLWELEKNRLKSREGFLYTAFASQADYEL
VLQYAKELDVVLWENASKRCFFGSLEGHANIKGFIERRTMGER
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgcgagggcacaggctctatgacgaggcactagcgacgctttcccgtcttcacatattg
cctactgcaacgggaaagttggcgctcaactcgacattcaaatcggggtttagacaggcc
attactggaggtggatcaagcggtagcttcggcgttcctgccgtagatcacgagaagaag
gacgacggcagaataccaccagacagagaagacaagcggggtccgccaagtatagctgct
ctggatgcctacgccctggaacggtgggagacaattttacactacatggtatcgtctgga
agcggacagcgcccaacggaaccctcaccaggtgtacgattcctcttgaaaacaagcggg
ctcatgaacgaaatacacgatgctcttcatatctcctctgctgggttccaatttctcctg
cattccccgcacgagcaactgtggcatctcttgctccagtacctgcaactggcagagcaa
cggagaatggaccttgtcgatgtcctgagcttcttcttcatgctgtcaacgatggaactt
ggacgggagtactccgtccaaaacctaacgaagacccagtcggctatgctggaagacttg
cgagactacggcctaatctggcaacgcaagcaaacatccaagcgtttcagccccacccgt
ctttccaccacactaacttcttcttctccacctctgccttccacatcaggagctagctct
gggccacaagaaggctttatcattctcgagactaattaccgcatctatgcgtatacagac
aaccccttgcaaacagccgtcttgagcctttttgcgtccttgaagtatcgcttcccgaat
cttgtcgttggttctatcaccagggaaagtgtgaagaaggcgcttctgaatggaatttcg
gccgaccagataatcagttaccttatcacacatgcgcatcccaacatgagaaagaataac
ccgttgcttccagtgaccgtccaggaccaaatacgactgtgggaactcgagaaaaatcgc
ctcaagtccagagaaggctttttatacaccgcttttgcgtcgcaagcggattacgagttg
gttttgcagtacgccaaggaactcgatgtggtattatgggagaacgcctccaagcgatgc
ttctttgggagtctcgagggccacgcaaacatcaagggcttcattgagcgaaggaccatg
ggcgagcggtga
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