Cephus cinctus (wheat stem sawfly): 107264659
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Entry
107264659 CDS
T07523
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
ccin
Cephus cinctus (wheat stem sawfly)
Pathway
ccin03013
Nucleocytoplasmic transport
ccin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107264659
09122 Translation
03013 Nucleocytoplasmic transport
107264659
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccin03019
]
107264659
03041 Spliceosome [BR:
ccin03041
]
107264659
Messenger RNA biogenesis [BR:
ccin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
107264659
Spliceosome [BR:
ccin03041
]
Complex C
Other components
EJC/TREX
107264659
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
107264659
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
Motif
Other DBs
NCBI-GeneID:
107264659
NCBI-ProteinID:
XP_015588644
LinkDB
All DBs
Position
Unknown
AA seq
651 aa
AA seq
DB search
MSLFETLRKEYSLHLYQCFKKSDISTFQKKCTEISANENDRKAAVDQSLRDTLLEIAWGN
VQELESYISFCIELCRKDLATASMPVMLLGDIFDTMTLDRCEQLFTFVENNVVVWKEDLF
FSACKNNLLRMCNDLLRRLSRSQQTVFCGRILLFLAKFFPFSERSGLNIVSEFNLENHTE
FGTEKSEEDVLDHISEDDDKLEAKIPIDYNLYRKFWALQDFFRNPNQCYNKMHWKVFSAH
ASNVLSAFSSFKLEDQRSCPTASIKMDTSSEGPPKETHYFAKYLTNQKLLELQLSDSNFR
RYVLLQFLILFQYLNSTVKFKSETHELKPDQVDWVKATTDQVYSLLSETPPDGPTFAETV
KNILKREEHWNAWKNEGCPPFKKPAPDSTNDGDEPKKPKRPRRRIGDVIRDAQAVGKYHM
GNPELTKLWNLCPNNLEACKSKDRDFLPSLETYFEEAIEQLDPAAMVEDEYKKVNDGNFG
WRALRLLARRSPHFFVHGNYPINKLPEYLETMIKKIAKDRPQTQSDSKNETEETPPPESN
DQEYNEDVLKQESEQVDAENAEVKIRKLNKVTPEMVAKLSEALKSDWKKLASKLGYTNDE
IEFFQSKPTQYEQCKSMLEIWAEEDEDASMENLAYILEGLNCTEALAILKS
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgtcactgtttgaaaccttaaggaaagagtacagtctacatttgtaccaatgtttcaag
aaatccgatatttccaccttccagaaaaaatgcacagaaataagtgcaaacgagaacgac
aggaaggctgctgtcgatcagtctcttcgtgatacactattagaaattgcatggggcaat
gttcaagaattagaatcttatatcagtttctgtatagagttatgtagaaaagatttagcg
actgctagtatgcctgttatgctgttgggtgatatttttgatactatgacattggaccgt
tgcgaacagcttttcacatttgtggaaaataatgtagtggtttggaaagaagatcttttc
tttagtgcctgcaagaataatctgctgagaatgtgcaatgatttattgcgaagattatct
cgctctcaacaaactgtcttttgtggcagaatactcttgttcctagcaaaattttttcca
ttttctgaacgttctggtcttaacatagttagcgagtttaatttggaaaatcacactgaa
tttggtactgagaagtctgaggaagatgttttggatcacatcagtgaagatgacgataaa
ttagaagcaaaaattcccattgattacaatctatacagaaagttttgggcattgcaagat
ttcttcagaaatccaaatcagtgttataacaaaatgcattggaaagttttctcagcgcac
gcttcaaatgtactctcggcattctcatcattcaaattggaggatcaacgcagctgtcct
accgcttctataaaaatggatacatcctccgagggacctccaaaggaaactcactatttt
gcaaaatatctgaccaaccagaagttacttgaactgcaattatcggattcaaattttcga
agatacgttctactacaattcttgatcctgtttcaatacctcaatagcaccgtgaaattt
aagtccgagacacatgaactaaagcccgatcaggttgattgggtaaaggcaacgactgat
caagtctactcgctgctatcagaaactccgccggatggtccaacttttgcagaaactgta
aagaatattttaaaacgagaagaacactggaacgcttggaagaatgagggttgtccaccc
ttcaaaaaacctgcaccagattccacgaatgacggggatgagccgaagaagccaaagaga
ccaagaagaagaattggagatgttatcagagatgcgcaggcagtaggaaaatatcacatg
ggaaatccggaattgaccaaactttggaatctctgtcctaataacttagaagcttgcaag
tcaaaggatagagatttccttccatccttggaaacatacttcgaggaagctatagaacag
ttagatccagctgccatggtagaagatgaatacaaaaaagtgaacgacggtaattttggc
tggcgagcattgcgtttactagcaagacgcagtccccactttttcgtccacggaaactat
cctatcaacaaattaccagaatatttagaaacaatgataaaaaaaattgccaaagaccga
ccgcagacacagtcagactcaaagaatgaaacagaggagactcctcctccagagtcaaac
gatcaagagtacaatgaagatgtgttaaaacaagaatccgagcaagtcgacgcagaaaat
gcggaggtaaaaattcgaaaattaaataaagtcacaccggaaatggtggcgaagctttcg
gaagctttgaagagtgactggaagaaattggctagtaaacttggctacacgaacgacgaa
atcgagttcttccaaagtaaaccaacgcaatacgaacagtgtaaaagtatgttagaaatc
tgggcagaggaggacgaggatgcatccatggagaatttggcgtatatccttgagggttta
aactgcaccgaagcactggcaatactaaaatcctaa
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