Cephus cinctus (wheat stem sawfly): 107267952
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Entry
107267952 CDS
T07523
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
ccin
Cephus cinctus (wheat stem sawfly)
Pathway
ccin03022
Basal transcription factors
ccin03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccin00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107267952
09124 Replication and repair
03420 Nucleotide excision repair
107267952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccin03021
]
107267952
03400 DNA repair and recombination proteins [BR:
ccin03400
]
107267952
Transcription machinery [BR:
ccin03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
107267952
DNA repair and recombination proteins [BR:
ccin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
107267952
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
VWA
DEDDh_C
DUF4428
Motif
Other DBs
NCBI-GeneID:
107267952
NCBI-ProteinID:
XP_015595667
LinkDB
All DBs
Position
Unknown
AA seq
404 aa
AA seq
DB search
MAEEEDEKEYRWETGYEKTWEAIKEDDHGMLEASVADIIHKAKRKRQSERKGGARLGMMR
HLFIILDCSASMMNQDLKPTRLLCSIKLLEDFVDEFFYQNPISQMGIIVTRNKRAEKISD
LTGNPKKHIKELQNLQHTALTGEPSLQNSLELALKSLRLLPSHASREILILIGSLTTCDP
GDINPLIKTMKVEGVRCSVIGLAAELCVCKRIASATGGEHSVVLDDKHYKEQLNAHIDPP
PATTRLDAALVKMGFPHHALHNSTTDAAMTVCMCHAESTDESSRLMSTGYLCPQCLSKHC
ELPVECRACGLTLVSAPHLARSYHYLFPVKPFREIAYESNTPSSCFGCQKSFSNTEKKVY
ICDKCMNVFCVDCEIFIHESLHTCPGCANNPDTFLKNADSLPAT
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggaggaagatgaaaaggaatatcgttgggagactggttatgagaaaacatgg
gaagctatcaaagaggacgatcatggcatgctcgaggcatctgtcgcagatattatacat
aaagcaaaaagaaaacgacagtccgaaagaaaaggtggtgcaagacttgggatgatgcgt
cacctttttataattcttgattgctctgcatccatgatgaaccaagacttaaaacctacc
cgtttactttgttctataaaactcttggaagactttgtcgacgagttcttctatcagaac
cctataagtcaaatgggaatcattgtaacaaggaacaagcgtgcagaaaaaataagtgat
ttaactggaaatcccaagaaacacattaaagaattgcagaacttgcaacataccgcttta
acaggtgaaccatctttacaaaactccttagaattggcactaaaatctctacgtttattg
ccatctcatgccagcagagagattctaattttaataggatctctcactacttgtgatcct
ggtgacattaatccattaattaagactatgaaggttgaaggagtacgctgcagtgtaatt
ggattggctgctgaattgtgtgtctgtaaacgtattgcgtcagctactggtggagaacac
agcgtagttctcgatgataaacattacaaagaacaattgaatgcacacattgatcctcca
ccagctacaacccgactcgatgcagctttggtcaaaatgggatttcctcaccatgctctt
cataattctactactgatgcagccatgacagtttgcatgtgtcatgccgaaagtacagat
gagtccagtaggttgatgtcgactggttatctatgtcctcaatgtcttagcaagcattgc
gaactgccagtagaatgtcgagcttgtggcttgactttagtatctgccccacacttagca
cgctcctaccattatttattccctgtgaaaccatttcgcgagatcgcatacgaatctaat
acgccaagttcttgtttcggatgccagaaaagtttttctaacaccgagaaaaaggtatat
atctgcgacaagtgcatgaacgttttctgtgtggactgtgagattttcatccatgaatct
ttgcatacttgtccgggctgtgcaaataatcctgatacatttctgaagaatgctgatagt
ttaccagcgacttag
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integrated database retrieval system
