KEGG   Curtobacterium citreum: QPK07_01675
Entry
QPK07_01675       CDS       T09163                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
ccit  Curtobacterium citreum
Pathway
ccit03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:ccit00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    QPK07_01675
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccit03400]
    QPK07_01675
Enzymes [BR:ccit01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     QPK07_01675
DNA repair and recombination proteins [BR:ccit03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     QPK07_01675
SSDB
Motif
Pfam: LigD_Prim-Pol LigD_N DNA_ligase_A_M DNA_ligase_A_C RNA_ligase DNA_primase_S
Other DBs
NCBI-ProteinID: WIJ45700
LinkDB
Position
321914..324418
AA seq 834 aa
MSPVSRRTTVQVGDRRIALSNTDKVLYPETGTTKGQVLAYYERVAPWMIPHVKDRPVTRK
RWANGVDGKVFFEKNLPDSAPDWIRHHTIAHKEHDTEYPVVDDLPTLVWMAQQAALELHV
PQWRFGPRGGQQHPDRLVLDLDPGEGVGLPECVEVAVAARELLQGMGLDPHPVTSGSKGI
HLYAALDGRSAAQHVSEVAHELARALEQDLPDLVLSSMSRAERAGKVFVDWSQNNGNKTT
IAPYSLRGRDRPTVAAPRTWDELTSRGLAQLTLDEVLDRLEERGDRLHPVASASLSVGRP
DSGHWDGDRTQRANDAEQPGRDRLAAYRAKRDASRTPEPVPEGAPTVRKDGTPTFVVQEH
HATRDHYDFRLEHDGVLVSWALPKGEPTDPGKNHLAVQTEDHPLEYGGFEGTIPHGEYGA
GTVTIWDDGTYELEKWREGEEVIVTLHGRTNGNRRLALLHTRGRGRGKDGDEKNWLIHRT
KEQPSRTPDEGGAAPSRGSGSGAASDGAGATTPTERRPMLASPVSGTPSFDPDAWAFEMK
WDGVRALATVRDGAVTLRSRNGNDLTAQYPELQELADRAGVDGVFDGEVVALDEAGRPSF
QRLQDRMGLTRKREVDAAQATTPVRFLLFDVLEADGHDLVRLGYDARRDALATVVDPGGA
IEVPPAFDGDFDAAVAESARLRLEGVVAKKRRSRYTEGRRSESWVKVKHLAAQEVVVGGW
KPGAGRRAGGIGSLLLGVPGPDGLEYVGKVGTGFRDRDLDEIADVLRSRARKTSPFVDVP
RPDARDAHWVRADRVGEVVFAEWTADGRLRQPSWRGWRPDKDPDDVVREAGPDT
NT seq 2505 nt   +upstreamnt  +downstreamnt
gtgagccccgtctcccggcgcacgacggtccaggtcggggaccgccgcatcgcactgtcc
aacaccgacaaggtcctgtacccggagacggggacgaccaaggggcaggtgctcgcctac
tacgagcgggtcgcgccgtggatgatcccgcacgtcaaggaccgtccggtgacacggaag
cgctgggcgaacggcgtcgacggcaaggtgttcttcgagaagaacctgccggactccgcg
cccgactggatccggcaccacaccatcgcgcacaaggagcacgacaccgagtacccggtc
gtcgacgacctgccgacgctcgtgtggatggcgcagcaggccgcgctcgagctgcacgtg
ccgcagtggcggttcggtccgcgcggtggccagcagcacccggaccggctcgtgctcgac
ctggacccgggtgagggggtcggcctgcccgagtgcgtcgaggtcgcggtcgccgcccgt
gagctcctgcagggcatgggcctcgacccccacccggtgacgtccggctcgaagggcatc
cacctgtacgcggcgctggacggacggtccgccgcgcagcacgtctccgaggtcgcgcac
gagctcgcgagggcgctcgagcaggacctgcccgacctggtgctgtcgtcgatgagccgc
gcggagcgcgccggcaaggtcttcgtcgactggtcgcagaacaacggcaacaagacgacg
atcgcgccgtactcgctgcgcggccgggaccggccgacggtcgccgcaccgcgtacctgg
gacgagctcacgtcgcgcggactcgcccagctcaccctggacgaggtgctcgaccgcctg
gaggagcgtggggaccgcctgcacccggtcgcgtccgcctcgctgtcggtcgggaggccc
gactcgggtcactgggacggcgaccggacccagcgtgcgaacgacgcggagcagccgggt
cgcgaccgcctcgccgcgtaccgcgcgaaacgggacgcctcgaggacgccggagccggtc
cccgagggcgcgccgacggtccggaaggacggcacaccgacgttcgtggtccaggagcac
cacgcgacccgggaccactacgacttccggctcgagcacgacggggtgctcgtcagctgg
gcgctcccgaagggcgagccgaccgacccggggaagaaccacctcgcggtgcagaccgag
gaccacccgctcgagtacggcggcttcgagggcacgatcccgcacggcgagtacggcgcc
ggcacggtcacgatctgggacgacggcacctacgaactcgagaagtggcgggagggcgag
gaggtcatcgtcaccctgcacggacggacgaacggcaaccggcgactggcgctcctgcac
acccgcggccgcggtcgcgggaaggacggcgacgagaagaactggttgatccaccggacg
aaggagcagccgtcgcggacgcccgacgagggcggggccgcgccgagcaggggctcgggc
tcgggcgcagcgtcggacggggctggggcgaccacgccgaccgagcggcgcccgatgctc
gcgtcgccggtgtcgggcacgccgtcgttcgaccccgacgcgtgggcgttcgagatgaag
tgggacggcgtccgggcactcgccaccgtgcgggacggcgccgtgacgctccgcagccgg
aacggcaacgacctgaccgcgcagtaccccgaactccaggagctcgccgaccgggccggg
gtcgacggggtgttcgacggcgaggtcgtggcgctcgacgaggcgggccgcccgtcgttc
cagcggctgcaggaccggatgggactgacgcggaagcgcgaggtcgacgcggcgcaggcg
accacgcccgtgcgcttcctgctcttcgacgtcctcgaggccgacgggcacgacctcgtc
cggctcggctacgacgcccgccgggacgccctggcgacggtcgtggaccccggcggtgcg
atcgaggtgccgccggcgttcgacggggacttcgacgcggccgtcgcggagtccgcccgg
ctgcggctcgagggggtcgtggccaagaagcggcgctcgcggtacaccgagggccgccgg
tccgagtcgtgggtgaaggtcaagcacctcgccgcgcaggaggtcgtcgtcggcggctgg
aagcccggggccggtcgtcgcgcgggcgggatcggctcgctgctgctcggggtccccggg
ccggacggactcgagtacgtcggcaaggtgggcaccgggttccgcgaccgcgacctcgac
gagatcgccgacgtgctccgctcccgggcccggaagacctccccgttcgtcgacgtcccc
cgaccggacgcccgggacgcacactgggtccgcgccgaccgggtcggcgaggtcgtgttc
gccgagtggacggcggacgggcggctgcgccagccgtcgtggcgagggtggcggccggac
aaggacccggacgacgtcgtccgcgaggccggacccgacacgtga

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