Coregonus clupeaformis (lake whitefish): 121531925
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Entry
121531925 CDS
T08357
Symbol
rasgrf1
Name
(RefSeq) ras-specific guanine nucleotide-releasing factor 1
KO
K04349
Ras-specific guanine nucleotide-releasing factor 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
cclu04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121531925 (rasgrf1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121531925 (rasgrf1)
BRITE hierarchy
Motif
Pfam:
RasGEF
RhoGEF
PH
RasGEF_N
GOLGA2L5
IQ
PH_11
PIN_12
MYO6_lever
Endonuc-EcoRV
BIG2_C
DUF641
Motif
Other DBs
NCBI-GeneID:
121531925
NCBI-ProteinID:
XP_041693426
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All DBs
Position
19:complement(42024539..42054741)
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AA seq
1259 aa
AA seq
DB search
MQKGIRLNDGHVTYLGLLAKKDGTRRGCLSKRSSDNTKWHTKWFALLQNMLFYFESESSS
RPAGLYLLEGCVCDRAPSPKPSQSSKECLEKQYYFTVNFTHENQKALELRTEDVKDGDEW
VAAITHASYRNLATEHETLMQKYLHLIQIVETEKTVAKQLRQQIEDGEIEIERLKSEISG
LHKDNGKIQSSPTAEPSEDDDSELKKIKKVQSFLRGWMCRRKWKTIIQDYIRSPHAESMR
KRNQVVFSMLDSEAEYVQQLHILVNNFLRPLRMAASSKKPPITHDDVSSIFLNSETIMFL
HQIFYQGLKARIASWPTLVLADLFDILLPMLNIYQEFVRNHQYSLQILAHCKQNRDFDKL
LKQYEAKPDCEERTLETFLTYPMFQIPRYILTLHELLAHTPHEHVERTSLDYAKSKLEEL
SRIMHDEVSETENIRKNLAIERMIVEGCEILLDTSQTFVRQGSLIQVPMSEKGKITRGRL
GSLSLKKEGERQCFLFSKHVIICTRGSGGKLHLTKNGVVSLIDCTLLEDPEGTDDEAKPD
KGVQDMEHLDFKIVVEPKEGQSFTVILVASSRQEKSAWTSDISQCIDNIRCNGLMMNAFE
ENSKVTVPQMIKSDASLYCDDVDIRFSKMMNSCKVLQIRYASVERLLERLTDLRFLSIDF
LNTFLHSYRVFTSADVVLDKLITIYKKPISAIPARSLELFFASSQNNKLLYGEPPKSPRA
SRKFSSPPPLAITKTSSPNRRRKLSLNIPIITGGKALDLAALSCSSNGYASMYSSMSPFS
KTTLDINKLYVTSPITSKIPDEGEGKTDKAEETILSKQDISVPEESDIDQNQCDDADPET
SPTKSPTTPKNMKCKNSSEFSLFSYNNGTVMSSCRPEMDNNNRSALSAASAFAIATAGAN
EGTPTKEKYRRMSLASTGFPTDQRNGDKEFVIRRAATNRVLNVLRHWVSKHSQDFESNTE
LKLKVIAFLEEVMHDPELLTQERKAAANIIRTLTQEDPGDNQISLEEVTQLASVGKAEAF
ESHSALEIAEQLTLLDHLVFKVIPYEEFFGQGWMKNDKNERTPYIMKTTKHFNDISNLIA
TEILRCDDVTTRVAVMEKWVAVADICRCLHNYNAVLEITSSLNRSSVFRLKKTWLKVSKQ
TKTVIDKLQKLVSSEGRFKNLREALKNCDPPCVPYLGMYLTDLAFIEEGTPNYTEDKLVN
FSKMRMISHIIREIRQFQQTAYKIDHQPKAAQYLLDNSSVLDEESLYEASLRIEPKVNN
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagggaatacgacttaatgatggtcatgtcacctacctgggtcttttggcaaag
aaggatggtacgaggcgaggttgcttgagcaaaaggagctcagacaacacaaaatggcac
acaaagtggtttgctttattacaaaatatgctgttttattttgagagcgagtccagctct
cgtcctgcgggattatacctgttggagggatgtgtgtgtgacagagcgccgtcacctaaa
ccctcacaatcatccaaggagtgtttagaaaagcagtactacttcactgtaaatttcacc
catgaaaaccagaaagccctggagttgcgtacagaggatgtaaaggacggtgatgaatgg
gtggctgcaataacacatgccagttacaggaacctggccacggagcacgagacgctcatg
cagaagtatctccatctaattcagatcgtggagacagagaaaacggttgctaagcaactt
cgacaacagatagaggatggggaaatagagattgaacggctaaaatcagagatttccggg
ctgcacaaagacaacgggaagatccagtcgagtccaacagccgaacccagtgaagatgat
gactctgaactcaagaaaataaaaaaagtgcagagtttcctacgaggctggatgtgcagg
aggaagtggaagaccatcatccaggactacatccggtctccccacgcagagagcatgagg
aagaggaaccaggtggtgttcagcatgctggactctgaggctgagtatgtccagcagctc
cacatactggtcaacaacttcctccgaccgctccgtatggccgccagctccaagaaacca
cccatcacccacgacgacgtcagcagcatcttcctcaacagtgagaccatcatgtttctg
catcaaatattctaccaagggttgaaagcaagaatagcaagctggccaacattagttttg
gcggacctgtttgacatcctgctgcccatgctaaacatctaccaggagtttgtgaggaac
caccagtacagtctgcagatcctggcacactgtaaacagaaccgagactttgacaagctg
ctgaagcagtatgaggccaagccagactgtgaggagaggactctggagaccttcctcacc
taccccatgttccagattccccgctacattcttactctccatgagctcctggcccacaca
ccacatgagcatgtggagaggacgagtctggactacgccaagtcaaagctggaggagctg
tccagaatcatgcatgatgaggtgagcgagacagagaacatcaggaagaacctggccatt
gagcgcatgatcgtagagggctgcgagatcctccttgacaccagccagacgttcgtcaga
caaggctctctcatccaggtgccaatgagtgagaagggcaagatcacccgtgggcgactg
ggctctctgtctctgaagaaggagggggagaggcagtgcttcctcttctccaagcatgtc
atcatctgcaccaggggctctggagggaaactgcacctcaccaagaatggcgtggtctct
cttattgactgcactcttctggaagaccccgaggggacagatgatgaggccaaaccagac
aagggtgtacaggacatggagcacctggactttaagattgtggtggagcctaaagaaggc
cagtcgttcacagtgatcctggtggcctcctcgcggcaggagaaatctgcctggaccagt
gacatcagccagtgcatagacaacatccgctgcaatgggcttatgatgaacgcatttgag
gagaactctaaagtcaccgtgccacagatgatcaagtcggacgccagcctctactgtgac
gacgtggacatccgtttcagtaagatgatgaactcgtgtaaggtgctgcagatccgctat
gccagcgtggaaagacttctggagaggctgaccgacctgcgcttcctctcgatcgacttc
ctcaacacctttctgcactcctaccgcgtcttcaccagcgccgatgtggtgctggacaaa
ctcatcactatctacaagaagcccatcagtgccatcccagcccgatccctggagttgttc
ttcgccagcagtcagaacaataaactcctatacggggagcctcccaaatcccccagggcc
agccgtaagttctcctcaccccctcccctggctatcaccaagacatcgtcccccaaccgc
cgacgtaaactctccctcaacatccccatcatcactgggggcaaggctctggacctggcc
gccctcagctgctcctccaacggctatgcaagcatgtactcctcaatgtcccccttcagc
aagaccaccctggacatcaacaagctctatgtcaccagccccatcaccagcaagatccct
gatgagggagagggcaagacagacaaggcagaggagaccattttgtctaaacaagatatt
tcagttccggaggaaagtgacattgaccaaaaccagtgcgatgacgcagacccagaaacg
tctcctaccaagtcgccaaccacccccaaaaacatgaagtgcaaaaactcttcagaattc
tccctgttttcctacaataatggcacggtgatgtcatcgtgccgccctgagatggacaac
aacaaccgcagtgccctctctgcagcctctgccttcgccatcgccacggcaggagccaat
gagggcacgcccaccaaggagaagtatcgccgcatgtccctggctagcacagggttccca
acagaccagaggaatggggacaaagagtttgtaatccgaagggctgcaaccaacagagtc
ctgaatgttctgagacactgggtgtcaaaacactctcaggactttgagagtaacactgag
ctgaagctgaaggtgatagccttcctggaggaggtgatgcatgacccggagctgctgacc
caggagaggaaagcagccgccaacatcatcaggaccctgacacaggaggaccctggtgac
aatcagatcagcctggaggaggtgacacagctggcgtcagtagggaaggcggaggcgttt
gagagccattctgccctggagatagcagagcagctcaccctactggaccacctggtcttt
aaggtcatcccatacgaagagttctttggtcaagggtggatgaagaatgacaagaatgaa
aggacaccatatatcatgaaaacaacaaaacatttcaatgatatcagtaacctgattgcc
acggagatcctgcgttgtgacgacgtgaccacgcgggtggcagtgatggagaagtgggtg
gcggtggcggacatctgccgctgtctccataactacaacgctgtgctggagatcacctcc
tccctcaaccgcagctctgtgttccgcctcaagaagacctggctcaaagtgtccaagcag
actaaaacagtaattgacaagctgcagaagttggtttcatcagaggggaggttcaaaaac
ctgagagaagctttaaagaactgtgaccctccctgtgtaccatatctggggatgtacctc
actgatctggctttcattgaggaggggacgcccaattacactgaggacaaattagtcaac
ttctcaaagatgaggatgatttcccatatcatcagagaaattagacaattccagcaaaca
gcatacaagattgatcatcagccaaaggcagcacagtatttgctggacaacagctctgtt
ctggatgaagaaagcctgtatgaagcctctctcagaattgagcctaaagtcaacaactga
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