Coregonus clupeaformis (lake whitefish): 121532022
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Entry
121532022 CDS
T08357
Symbol
sin3aa
Name
(RefSeq) SIN3 transcription regulator family member Aa isoform X4
KO
K11644
paired amphipathic helix protein Sin3a
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121532022 (sin3aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121532022 (sin3aa)
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
121532022 (sin3aa)
REST complex
121532022 (sin3aa)
Heterochromatin formation proteins
Other heterochromatin formation proteins
121532022 (sin3aa)
BRITE hierarchy
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
Motif
Other DBs
NCBI-GeneID:
121532022
NCBI-ProteinID:
XP_041693595
LinkDB
All DBs
Position
Unknown
AA seq
1271 aa
AA seq
DB search
MKRRLEEQEPVFASQQRRLPGSTEALQHRVLAPAPAAYEAVADSMQPTAGSIQYSVPQGY
QAPNVPQNSSGHGHAPSPAVHHHSPAVQPHGPPVMQGHAHPPASAQGQQQFQRLKVEDAL
SYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIMGFNTFLP
PGYKIEVATNDLVNVTTPGQIHHITPHGISVSQIPLTGPPTPLQPQVPAPTTTSAPPPPT
QPTPAKMSKPLQSPALTPSSQPNPSIPAYAPPRSPTLQPHTPITGTPNAPPLQNNQPVEF
NHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYAQVAR
LFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKAESVRNDHGGTAKKPQLNNKQRPNQNGC
QIRMHSGTGATPPVKKKPKLLNLKDSSLAEASKHGVGTESLFFEKVRKVLLSAEAYDNFL
RCLVIFNQEVISRAELVQLVLPFLGKFPELFNWFKNFLGYREMSHTERYPKERAMEGIAM
EIDYASCKRLGSSYRALPKSYMQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQ
YEEHIYRCEDERFELDVVLETNLATIRMLETVQRKLSRMSAEEQAKFRLDNTLGDSPEVI
HRKAIQRIYGDKAPDIIDGLKKNPAVSVPIVLKRLKTKEEEWREAQRGFNKIWREQNEKY
YLKSLDHQGINFKQNDTKVLRSKTLLNEIESIYDERQEQASEENTALPSGPHLTLTYEDS
QILEDAAALIIHHVKRQTGIQKEDKYKIKQIIHHLIPDMLFTQRGELSDVEEEEEEEVEE
MELDEGVAKKRNCVAQGGSPNKSSKLLFCNTGAQKLRSCAEAYNLFYVNNNWYIFLRLHQ
TLCSRLMRIYGQAERQIEEDIRERDREGEGLGLKRDKNENPAIQLRLKEPMDIEVEDYYS
SFLEMVRNLLDGNMESAQYEDSLREMFTIHAYTAFTMDKLIQSIVRQLQHIVSDEICVQV
TDLYLAESTNGATGGPLPTQTSRASTEGCYQRKAEQIMSDENCFKLMFLKNRGHVQLTVE
LLDTEEENSDEPMEAERWSDYVGRYLNSDSTSPELREHLAQKPVFLPRNLRRIRKFQRGR
EQLEKEASEGEKKSMESAENLQMECMFKLNSYKMVYVFKSEDYMYRRTALLRAHQSHERV
STRLHKRFQAWVDSWVKEHVTRDMAAETNKWLMGEGRDGLVPCTTTREPDILHFMNINKY
RVKYGSPFNAP
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtcgcttggaggaacaggaaccggtatttgcgtcccaacagcggcgcctcccc
ggcagcacggaggctctccagcaccgcgtcctggccccggcgccggccgcgtatgaggcc
gtggccgacagcatgcagcccactgcaggcagcatccagtattctgtcccacagggctac
caggcccccaatgtgccacagaactcaagtggccatgggcacgcccctagcccagctgta
caccaccacagcccagcagtccagccccacgggccccctgtgatgcagggccacgctcac
ccccctgcgtcagcccagggccagcagcagttccagaggctcaaggtggaagatgctttg
tcctacctggaccaagtgaaactgcagtttggcaaccagcctcaagtctacaatgatttc
ctggacatcatgaaggagttcaagtctcaaagcattgacactccaggggtgataagcagg
gtatcccagctcttcaaaggccaccccgacctcattatgggcttcaacaccttcctgcca
ccgggctacaagatcgaggtcgcgactaacgacctggtcaatgtgaccacgccgggtcag
atccaccacatcacccctcacggcatctctgtctcgcaaatccccctgacgggaccaccc
accccgctccagccccaggtgccagcccccaccaccacctctgccccgccccctcccaca
cagccaacccctgccaagatgagcaagccactgcaatctccggccctcacgccaagcagc
cagcccaatccgtccatccccgcctatgcccccccccgatccccgacactgcagccccac
accccgatcactggcacgcccaacgcccctccgctgcagaataaccagcctgtggagttc
aatcacgccatcaactacgtcaacaaaatcaagaaccgtttccagggccagcccgacatc
tacaaagccttcctggagatcctgcacacctaccagaaggagcagcggaatgctaaggag
gcaggagggaactacaccccagccctgacagagcaggaggtctatgcccaggtggcccgg
ctcttcaagaaccaggaggaccttctctcggagtttggccagttcctaccagatgccaac
agctcggtgctgttaagcaagacgacagcagagaaggcggagtctgtgcggaatgaccac
ggtggcacagcgaagaagccgcagctcaacaacaaacagaggcccaatcagaacggctgc
cagatccgcatgcactctggtacaggtgccacaccccctgtcaagaagaagcccaagtta
ctgaatttgaaagactcgtccctggcagaggccagcaaacatggagttggcacagaatct
ctgttctttgagaaggtgcggaaggtcttgctaagtgcagaggcctatgacaacttcctg
cgttgtttggtcatcttcaaccaggaggtcatctccagggccgagctggtgcaactggtg
ctgcccttcctggggaaattcccagaactgttcaattggttcaagaacttcctaggatac
cgggaaatgtcccacactgagcgctatcccaaggagcgtgccatggagggcatcgccatg
gagatcgactatgcttcctgtaagaggctaggctcgagctatagagcactgccgaagagc
tacatgcagcccaagtgcaccgggagaacgccactgtgcaaagaggtcctcaatgacacc
tgggtgtccttcccttcctggtctgaagactccacctttgtgagctccaaaaagacccag
tatgaggagcacatctacagatgtgaggatgaacgcttcgagctggacgtggtgctggag
accaacctggccaccatccgcatgctggagaccgtacaaaggaaactgtcccgtatgtct
gccgaggagcaggccaagttccgcctggacaacacgctgggagactccccggaggtcatc
caccgcaaggccatccagaggatatacggtgacaaggcccctgacatcatcgatgggctc
aagaagaaccctgccgtgtctgttcccattgtgctaaagaggttaaagaccaaggaggag
gagtggagggaagcccagaggggcttcaacaagatctggagggagcaaaatgagaagtat
tacctgaagtctctcgaccaccaaggtatcaacttcaaacagaacgacaccaaggtgcta
cgatccaagacactgctcaatgagattgagagcatatacgacgagcgacaggagcaggcg
tcggaagagaacaccgcactgcccagcggcccccacctgactttgacctacgaggacagc
cagatcctggaggacgctgctgccctcatcatccaccacgtcaagcggcagacgggcatc
cagaaggaggacaagtacaagatcaaacaaattattcaccacttgatccccgacatgctg
ttcacccagcgcggcgagctctcggacgtggaggaagaagaagaagaggaggtagaggag
atggagctggatgagggcgtggccaagaagcgcaattgcgtcgcgcaaggcggtagccca
aacaagtcctccaagctcctcttctgcaacactggtgcccagaagctgcgaagttgcgcc
gaggcctacaatctattttacgtcaacaataactggtacatcttcctgcggcttcaccag
acactgtgctcgcggctgatgcgaatctacgggcaggcggagaggcagattgaggaggac
atccgggagcgtgaccgggagggagaggggctgggcctcaagcgagacaagaacgaaaac
cctgccatccagctgagactgaaagagcccatggatatcgaggtggaggactactactct
tccttcctggagatggtgcggaaccttctggatggcaacatggagtcggctcagtacgag
gactcactccgggagatgttcaccatccatgcctacaccgcattcaccatggacaaactc
atccagagcatcgtcaggcagctccagcacatagtgagtgatgagatctgcgtgcaggtg
acagacctgtacctagcagagagcaccaacggggccaccggaggtccccttcccacccag
acatccagagcttccacagagggatgctaccagcgcaaggcggagcagatcatgtctgac
gagaattgcttcaagcttatgtttctgaagaaccgaggccatgttcagctgacggtggag
cttctggacaccgaggaggagaactctgatgaacccatggaggcagagcgctggtcagat
tacgtgggtcgctacctgaattctgactctacctctccagagttgcgggaacaccttgct
cagaaacccgtcttccttcccaggaaccttcgtcggatacggaagttccaaaggggtagg
gagcagctagagaaggaggccagcgagggagagaaaaagtccatggagagcgctgaaaac
cttcaaatggaatgtatgttcaagctcaactcctacaagatggtgtatgtcttcaagtct
gaggactacatgtaccgacgcactgccttgctgcgtgctcaccagtcacacgagagagtg
agcactcggctgcacaaacgcttccaggcctgggtcgactcctgggtgaaggagcacgtc
actcgcgacatggccgctgagaccaacaagtggctgatgggagaggggcgtgacggcctg
gtgccatgcaccaccacccgcgagccagatatcctccacttcatgaacatcaacaagtac
cgtgtcaaatacggctcacccttcaatgcaccataa
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integrated database retrieval system
