Coregonus clupeaformis (lake whitefish): 121532345
Help
Entry
121532345 CDS
T08357
Symbol
ppfibp2b
Name
(RefSeq) liprin-beta-2b isoform X1
KO
K27096
liprin-beta
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121532345 (ppfibp2b)
Membrane trafficking [BR:
cclu04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
121532345 (ppfibp2b)
BRITE hierarchy
Motif
Pfam:
SAM_1
SAM_2
DUF16
FxsA
WHEP-TRS
HalX
Motif
Other DBs
NCBI-GeneID:
121532345
NCBI-ProteinID:
XP_041694200
LinkDB
All DBs
Position
6:50336258..50416108
Genome browser
AA seq
986 aa
AA seq
DB search
MASDASHMLEAALEQMDDIIAGSKAAAEYTNGLFDLGSSGSAGPLQVLQLVEDLRLALEL
QPREEERNTLRTHVPSRTAHMLMDWLDVDRGSDRGSVNLRSPLNNESYQERLVRLEGDKE
SLVLQVSVLTDQVEAQGEKIRDLESSLEEHHHKLNSTEEMLQQELLSRTSLETQKLDLMD
EVSYLKLKLVGMDEEQNHNDSSEDQQNKAECVVNLISELQEQMCRFQEEIHTRIMEKRAM
EARGEAQGESGAREAHDQNPDVGLGGSDVDEFCCRCGGQNGLLQELRLLKSKVDVLEVEK
SQYERKLKATKTEISDLQQILASKDSEIEGLQRQLVSRGPMTNENPERVEVFRRLLTDKY
QEFQRLKMGMETLLAANDEKDRHIEELTVLLRQYRKMKEVMALAQVSSEKLLVGSSEEEL
SGSLKMRALTHKAHSDIIRSEMSSRCSSPLLVSSSSFQKELDSSIQTSLETSMVMVSPSD
VGCFHNGQWSQPRMLSSSLEELQSGSLPKHVVGQPVEAVSENRHMEMNKYQTLPGKLCRP
DMNGDQEQYATQVQLSPDDSEDSELNLRKSERLDESTLSDLSPLSSGVDSGQQSPVSPEN
RKNHLGIKKLWGKIRRTQSGSLQREDLEPGEFKRGGLRATAGPRLARTGETLTSVWDLKT
PFSKWTPEQVCCWLEEYGLDQYVILARHWANSGQTLLSASPHDLEKEMGIKNPLHRKKLQ
LALKSFSTKMTEKSSELDHIWVTRWLDDIGLPQYKGQFHEGRVDGRMLQYLTVNDLLFLK
VTSQLHHLSVKCAIHVLHVNKFNPNCLKRRPGDENKTSPSEVVQWSNHRVMEWLRSVDLA
EYAPNLRGSGVHGGLIILEPRFNSDTLAMLLNIPPQKTLLRRHLATNFNMLVGSQAQQEK
REFMESSGYAPLSTTAKVRPKKLGFSNFGHLRKKRCDESTDYICPLEEAQVQTVVNGAHR
PYSGFRGLSPILDRDPDRREQVGPNC
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagatgcaagtcacatgttggaggcggccttggagcaaatggatgacatcatt
gcaggctccaaggctgcagccgagtacaccaatggcctgtttgatctgggctcctcaggt
agcgcggggcccctgcaggtgctgcagctggttgaggacctgaggctggccctggagctg
cagcctagagaggaggagaggaacacccttaggacccacgtccccagcagaaccgctcac
atgctgatggactggctggacgtggacaggggctcagacaggggctcggttaacctccgc
tccccgttgaacaatgagagctatcaggagcgtctggttcgcttagagggggacaaagag
tctctggttctccaggtgagtgtgctcacagaccaggtggaggcccaaggagagaagatc
agagacctggagagctctctggaggagcaccatcacaaactcaactccactgaggaaatg
ctacagcaggagctgctgagccgaacctcattggagacccagaaactagatctgatggat
gaggtttcctacctgaaactgaagctggtcggcatggacgaggaacagaaccacaacgac
agcagcgaggaccaacagaacaaagctgagtgtgtggtaaatctgataagcgagctccag
gagcagatgtgtaggtttcaggaggagatccatacccgcatcatggagaaacgggccatg
gaggcccggggggaggcccagggggagagtggtgcccgcgaggcccacgaccagaacccc
gacgtgggcttgggtggttctgacgtggatgagttttgctgtcgctgtggaggacagaat
ggcttactgcaagaactccggctcctcaagagtaaagtggatgtgctggaggtggagaaa
tcacagtatgagagaaaactaaaggccacaaagacggagatatcagacctacagcagata
ctggcttccaaagactctgagattgagggcctacagagacagctagtctccagaggccca
atgaccaatgagaacccagagagagtggaggtctttaggagactgctgacagacaaatac
caagaattccaaaggttgaaaatggggatggagactttgttagcggcaaatgatgaaaag
gaccgtcacatagaggagctcactgttctcctgagacagtacaggaagatgaaggaggtg
atggccctcgctcaagtgtccagtgagaagctcctggttgggagcagtgaggaggaactg
agcgggagtctgaagatgagagctctcacacataaagctcattcagacatcatccggtca
gagatgtcttccagatgctcctctcctctgttagtgtcttcctcatccttccagaaagag
ctggactctagtatccagacctccctggagacgtccatggtgatggtctccccgagcgac
gttggctgcttccacaacggacaatggtcccaaccacggatgctttcaagcagcctggag
gagttacaaagcggatcgttaccaaagcatgtagttggtcaaccagttgaagcggtttca
gagaatcggcacatggaaatgaacaaatatcagaccctaccagggaagctatgtcgacct
gacatgaatggggatcaagagcagtatgccacacaagtccagctgtcccctgatgatagc
gaggacagtgagttgaacctaagaaaatcggagagactggatgagtccacgctgtcggac
ctgtcccccctgtcgtctggagtggactcaggacagcagtctcctgtctccccagagaac
aggaagaaccacctgggcatcaagaaactctgggggaagattcggaggacccagtctggc
agcctgcagagagaggaccttgagcctggagagtttaagagggggggactgagagccacc
gccggccctcgtctggcccggaccggagagacattgacctctgtgtgggatttgaagaca
cccttctccaagtggactccggagcaggtctgttgctggctggaggagtatgggctggac
cagtatgtgattctggctcgacattgggccaacagtgggcagaccctcctctccgcctca
ccacatgacttagagaaggaaatggggattaagaatccactgcacaggaagaagttacag
ttggccctcaagtccttcagcaccaaaatgactgagaaatcctctgaactggaccacatc
tgggtcacacgttggcttgatgacattggtttacctcagtacaagggtcagtttcatgag
ggaagggtggatggcagaatgcttcagtacttgacagtgaatgacctcttgttcctgaaa
gtgaccagtcagcttcatcatctcagtgtgaagtgtgctattcacgtcctccacgtcaac
aagttcaaccccaactgcctgaagagaagacctggagatgagaacaagacatctccctcg
gaggtggttcagtggtctaaccacagggtgatggagtggcttcgctcagtggacctggca
gaatacgcccccaatctgaggggcagcggggtgcacgggggcctcatcattctggagcct
cgttttaactcggataccctggccatgctgctgaacatcccccctcagaagaccctgctg
cgacgccacctggccaccaacttcaacatgctggtgggctcccaggctcagcaggagaag
agggagttcatggagtcgtcgggctacgctcccctcagcaccacagccaaagtcaggcca
aagaagttgggcttctcaaacttcggccacctgaggaagaagaggtgtgacgagtcaaca
gactatatttgccccctggaggaggcccaggtccagacggtggtgaacggggcccaccgg
ccctactccggcttcaggggcctcagccccatcctggacagagacccagacagacgggag
caggtggggccaaactgctga
DBGET
integrated database retrieval system
