Coregonus clupeaformis (lake whitefish): 121533767
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Entry
121533767 CDS
T08357
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13-like isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121533767
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121533767
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121533767
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121533767
Peptidases and inhibitors [BR:
cclu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
121533767
Ubiquitin system [BR:
cclu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
121533767
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121533767
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP_var
UBA
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
121533767
NCBI-ProteinID:
XP_041695922
LinkDB
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Position
17:73434615..73507438
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AA seq
869 aa
AA seq
DB search
MAADLGELLVPYMPTIRVPRTGDRVFKSECAFSYDSPESEGGLYVCMNTFLGFGREHVER
HYRKTGQSVYIHLKRHIKEKPTGAAGGAIPRRRNGKVFLDLELNCDFNGDEYVCEDEAKL
VIFPDHFEIPLPNIEELPALVTIACDAVLNAASAYKKQEPDSWEEEIQVSKHARSLRQQD
NGVRIPPSGWKCQKCEMKENLWLNLSDGAVLCGKWFFDGAGGNGHALDHFKDTNFPLAVK
LDNITPDIADIYSFDEEEAVLDPQISEHLQHFGIDMIQMQWDGTENGHHNTNNMRPRVSE
WEVIQESGMKLKAVYGSGFTGIKNLGNSCYLGTTMQVLFSIPEFQRAYVGNLQRIYDYSP
LDPSTDFSTQMAKLGHGLLSGMYSKPPMKSELIEQVTKEEYKVLDWHQPKGISPKMFKAL
VSNGHPEFSSNRQQDAHKFFLHLINLVERNSVGLENPNDAFRYLVEERVQCCQTQKVRYT
QKVDYLMQLPAAIEAASNREELIVYEAKRNEAEENMRAPPEPVRARIPFTACLQAFMEPE
NVPDFWSSELQAKSTGVKTSRFASFPEYLVVQIKKFTFGVDWVPKKVDLSIDIPDFLDLS
RLRGTGLQAGEQELPDLTPPIVLPEDTRDNSMNSSDSPEIDESAAMQLAEMGFPLEACRK
AVYYTGNMGPEMAFNWIIAHMEEPDFAEPLALPNFMEPGPSVASPGLAATPLDNQPPEES
IAILTSMGFPPRHTVQALKATNNNLERALDWIFTHTEREEEEETSDALSDMADTTEPNDN
AFSNANTHSNSTLPPDQDASGPRIKDGPGRYELFAFISHMGASTMSGHYVCHIKKEGRWV
IFNDHKVCLSERPPKDLGYIYFYRRLSCS
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagatctaggagagctgctggtcccttatatgcccaccattagagttcccaga
acaggagacagggttttcaagagtgaatgtgccttttcctacgattctcccgagtctgag
ggaggcttgtatgtgtgtatgaacacattcctgggctttggcagagaacatgtggagaga
cattaccgtaaaaccggacagagtgtttacattcacctcaaacgccatatcaaagagaaa
cctacaggtgctgcagggggtgccatccccagaagaagaaacggaaaagtgttcctagat
ttagaactaaactgtgattttaacggagatgagtatgtgtgtgaagacgaggccaagctc
gtcatatttccagaccacttcgagatccccttaccaaatattgaggagttgcctgcactg
gtgacaatagcctgcgatgccgtgctcaacgccgcgtcggcctacaaaaaacaggagccc
gactcctgggaggaggagatccaggtttccaaacatgccaggagtctccgacagcaggac
aacggcgtgaggatcccacccagtggctggaaatgtcaaaagtgtgagatgaaagagaac
ctgtggctgaacctgtcggacggagcggtgctttgtgggaagtggttctttgatggtgcc
ggaggaaacggccatgccttggaccacttcaaagacaccaacttccccctggcagtcaag
ctggacaacatcaccccagacatagcagatatttattcgttcgatgaagaagaagcagtc
ctggacccacaaatatccgaacacttgcaacactttggaatagacatgatacagatgcag
tgggatggaacagaaaatggccaccacaacacaaacaacatgcggccacgagtcagtgag
tgggaggtgatccaggagtctggcatgaagctgaaggcagtgtatggctcgggtttcacg
ggcatcaagaacctgggcaacagctgctacctgggcaccaccatgcaggtcctcttcagc
atccctgagttccagagggcgtatgttggaaatctacagaggatatatgactactcacct
cttgaccccagcacggacttcagcacacaaatggctaaactgggccacggactcctctca
ggcatgtactccaaaccaccaatgaaatccgagctcattgaacaggtgacgaaagaagaa
tacaaggtattagactggcaccagccaaagggcatctctcccaagatgttcaaagccctg
gttagcaatggccaccccgagttctcctccaacagacagcaagatgcacacaagtttttc
ctgcatctcatcaacctggtggagagaaacagtgtgggcttggagaaccccaatgatgcg
ttccgctacctggtggaggagcgtgtgcagtgttgccagacgcagaaggtgcgctacacc
cagaaggtggactacctcatgcagctccctgctgccatcgaggccgcatccaacagagag
gagctgatagtgtatgaggccaagcgaaacgaagcagaggagaacatgagggcccctcca
gagcctgtgagggcccggatccccttcacagcgtgcctgcaggccttcatggagccagag
aacgtccctgacttctggagctcagagctgcaggccaaatcaactggagtcaagacttcc
cgtttcgcctccttcccagagtatctggtggtgcaaataaagaaattcacatttggggtg
gactgggttccaaagaaagtagatctgtccatagacatcccagacttcctggacctgtct
cgactccggggaacaggactgcaggcgggagaacaagagctcccagacctcacccccccc
atcgtcctccctgaagacaccagagacaactcgatgaactcctcagattccccagaaata
gacgagtcggcggcgatgcagctggcggagatgggcttccctctggaggcctgtcggaag
gccgtctactacacggggaacatgggccccgagatggcctttaactggatcatagcccac
atggaggagcctgactttgctgagcccctggcactgccaaacttcatggagcccggcccc
tccgtggccagcccgggcctggctgccacccccctggacaaccagcctccagaggagagc
atcgccatcctcacctccatgggcttccccccccgccacaccgtccaggccctcaaagcc
acgaacaacaacctggagcgggcgctggactggatcttcacccacacggagagggaggag
gaggaggagactagcgacgccctgtctgacatggccgacaccacggagcccaatgacaac
gctttctccaatgccaacacgcacagcaactccacactgcccccagaccaggacgcctca
ggcccccggatcaaggacggacccggacgttacgagctttttgctttcatcagccacatg
ggagcgtccacgatgtctggtcattatgtatgccacatcaaaaaggaaggaagatgggtg
atcttcaacgaccacaaagtgtgcttgtcagaaaggcctccaaaagacttgggctacatc
tatttttaccgtcgactgtcgtgcagctag
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