Coregonus clupeaformis (lake whitefish): 121534051
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Entry
121534051 CDS
T08357
Name
(RefSeq) polycomb group RING finger protein 5-B-like isoform X1
KO
K11489
polycomb group RING finger protein 5
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
121534051
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121534051
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
121534051
BRITE hierarchy
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_4
zf-RING_5
zf-RING_10
zf-C3HC4_3
Actin_micro
zf-Nse
TRAF3_RING
zf-RING_6
zf-rbx1
zf-C3HC4_5
E3_UbLigase_R4
DUF1272
Motif
Other DBs
NCBI-GeneID:
121534051
NCBI-ProteinID:
XP_041696457
LinkDB
All DBs
Position
1:14277808..14297303
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AA seq
236 aa
AA seq
DB search
MTSPRKHLVKDFNHFITCYVCKGYLIKPTTVTECLHTFCKSCVVQHFEDSNDCPKCGIQV
HETNPLEMLRLDNTLEEIIFKLVPGLREKEQQQEIEFWRSRKLKENGEEDGPRSKRSRLD
DDDDDDGGDGDYHRSDPQIAICLDCLLNKSLVGENIVKGLMKKFIRCSTRVTVGTIKKFL
SLKLKLPSSYELDVLCNGEIMGKDHTMEFIYMTRWRLRGETAYPMVLEYRPRIDFG
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgccgagaaagcacctggtcaaggatttcaaccactttatcacatgctacgtg
tgtaaagggtacctgatcaagcccaccacggtgacagagtgcctgcacaccttttgtaaa
agttgcgtcgtccaacactttgaagacagcaatgactgccccaaatgcggcatccaagtc
catgaaaccaaccctctagagatgttaaggttggacaacactttagaggaaatcattttc
aaactcgtgcctgggctaagagaaaaggaacaacagcaggagatcgagttctggaggagt
cggaagttaaaggagaatggagaagaagatggcccccgatcgaagagatccaggctggat
gacgacgatgatgatgatggtggcgatggagactaccacaggagtgaccctcagatagcc
atctgtctggactgtctactcaacaaaagcctggtgggagagaacattgttaagggctta
atgaagaaatttatacgctgctcgactcgagtgacagtcggaacaatcaagaagtttctc
agcttgaagttaaagcttccaagttcttatgagctagacgtcctatgcaacggggagatc
atgggaaaagaccacaccatggagttcatctacatgacgcgatggagacttcgcggtgaa
accgcctacccaatggtactagaatatcggccacggatagactttggttga
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