Coregonus clupeaformis (lake whitefish): 121536068
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Entry
121536068 CDS
T08357
Name
(RefSeq) ubiquitin-protein ligase E3A isoform X1
KO
K10587
ubiquitin-protein ligase E3 A [EC:
2.3.2.26
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121536068
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121536068
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
121536068
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
HECT type E3
121536068
BRITE hierarchy
Motif
Pfam:
HECT
AZUL
Motif
Other DBs
NCBI-GeneID:
121536068
NCBI-ProteinID:
XP_041699310
LinkDB
All DBs
Position
Unknown
AA seq
866 aa
AA seq
DB search
MNSDERDCECAPPQAETSPAGGYHRTQEESDIENPEASRMKRAAAKHLIERYYHQLTEGC
GNDSCSNAWCASSQGFRRLDNNAAAVKALELYKSNARLCDLHPSKKGTTMNHCVKDDFKD
VNYLTEEKVYEILHICAEKEDYSPLIRVIGRVFSSAEGLVQSFRLSKPPTKEELKSLQSK
DEDKDEDEEEAAAMEEDSPGSSSRLDGAASGDNDVGKLGPDEVSVDIDAVRRVYQRLLSN
DKIEAAFLNALVYLSPNVECDLTYHNVYSRDPNYLNLFVVVMENSNLHSPDYLEIALPQF
CRAMSKLPLPALAKLARLWSHYSAERIHRIMETFQQLITYKVVSNEFNSRNLVNDDDAVV
AATKCLKIVYYANVLGGEVDTEHNEEEDDEPIPESSELTLQELLGEERRNKKGPRVDPLE
TELTIRTSDSRRPLIPFEEFVNEPLNEVLEMDKDYTFFKVETENKFSFMTCPFILNAVTK
NLGLYYDNRIRMYSERRITVLYSLVQGQQLNPYLRLKVRRDHIIDDALVRLEMIAMENPA
DLKKQLYVEFEGEQGVDEGGVSKEFFQLVVEEIFNPDIGMFAYDERTKMFWFNPSSFENE
GQFTLIGIVLGLAIYNNCILDVHFPMVVYRKLMGKKGTFRDLADSNPVLHQSLKELLEYE
GSVEEDMMITFQISQTDLFGNPLMYDLRENGDTIPVTNENRKEFVAQYAEYMLNKSVEKQ
FKAFRRGFHMVTNESPLKYLFRPEEIELLICGSRNLDFQALEETTEYDGGYSRDSRIIKE
FWETLHSFAEEQKRLFLQFTTGTDRAPVGGLGKLKMIIAKNGSDTDRLPTSHTCFNVLLL
PEYDTKEKLRERLLKAILYAKGFGML
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgaattccgacgagagggactgtgagtgtgcgccaccacaggccgagacatcccctgca
ggaggataccacagaacacaagaggagtctgacatagaaaaccctgaagcaagccgaatg
aagcgagcagccgccaagcatctaatagagcgctactaccaccagttaacggagggctgt
ggaaatgactcgtgctcgaacgcgtggtgcgcttcgtcccagggcttccgccgcttggac
aacaatgcagccgccgtcaaggccctggagctgtacaagagcaatgccagactgtgcgac
ctgcacccctccaagaaaggcaccacaatgaaccattgtgtaaaggatgacttcaaagat
gtgaattacctaacagaggagaaagtgtatgagatcctacacatctgtgcggagaaggag
gactactcccctctgatccgggtcataggacgggtgttctccagcgcagagggcctggtg
cagagcttccgcctgtccaaaccacccaccaaggaggagctcaagtccctccagagcaag
gacgaggacaaagacgaggacgaggaggaagctgctgctatggaggaggactcgcccggc
tcctcatcccggttagacggcgctgcctcgggggacaacgatgtgggcaagctgggtcct
gacgaggtgtctgtggacatcgacgcggtcaggagggtctaccagagactgctgtccaat
gataagatcgaagctgccttcctcaacgcgctggtctacctgtcgcccaacgtggaatgt
gacctgacttaccacaacgtctactcccgggaccccaactacctgaacttgtttgtggtg
gtgatggagaacagtaacctccacagcccagactacctggagatcgccctgccccagttc
tgcagggccatgagcaagctgcccctgcccgcgctggccaagctggcccgcctgtggtct
cactacagtgcggagcgcatccaccgtataatggagaccttccagcagctcatcacctac
aaggtggtcagcaacgagttcaacagccgcaacctggtgaacgacgacgatgcggtggtg
gctgccaccaagtgcttgaagatcgtctactatgccaacgtgctgggaggggaggtggac
acggagcacaacgaagaggaggatgacgagcccatccctgagtccagcgagttgacgctg
caggagctgctgggggaggagaggaggaacaagaagggcccccgggtggaccccctggag
acagagttgaccatccggacgtccgacagccggcggcccctcatccccttcgaggagttt
gtcaacgagcccttgaatgaagtcctagagatggacaaggactacacattctttaaagtg
gagacggagaacaagttctccttcatgacgtgtccgttcatcctcaacgccgtgaccaag
aacctgggcctgtactacgacaaccgcatccgcatgtacagcgagcgacgcatcacagta
ctgtacagcctggtgcagggacagcagctcaacccctacctgaggcttaaagtacgccga
gaccacatcatcgatgacgccctcgtcaggcttgagatgatcgccatggagaatcctgca
gacttgaagaagcagctgtatgtggagtttgaaggagagcaaggtgtagatgaaggaggg
gtttccaaagagttctttcagcttgtcgtggaggagatcttcaacccagatattggaatg
tttgcgtacgacgagcgcaccaagatgttctggttcaacccatcctcgtttgagaacgag
ggtcagttcacgctgatcggcatcgtcctgggcctggccatctacaacaactgcatcctg
gacgttcacttcccaatggtggtctacagaaagctcatgggcaagaaaggaaccttccgg
gacctcgcagactctaatccggttctgcaccagagtctgaaggagctgttagagtacgag
gggagtgtggaggaggacatgatgatcaccttccagatatcccagacggacctgttcgga
aaccccctcatgtacgacttaagggaaaatggggatacaattccagtcaccaacgagaac
agaaaagagtttgtagctcagtatgcagagtacatgctgaataagagcgtggagaagcag
ttcaaagccttcagaagaggttttcacatggtcaccaacgagtccccgctgaaatattta
ttccggccggaggaaatcgagctgctcatctgtggaagcaggaacctagactttcaagca
cttgaagaaaccacagaatacgatgggggctacagcagagattcacgcattattaaagag
ttctgggagaccttgcactcgtttgctgaggagcagaagaggctgttcctgcagttcacc
acgggcacagacagagcccctgtcggaggcctgggcaagctcaagatgatcatcgccaag
aacggctccgacacagacaggttacccacatctcacacctgctttaacgtgctgctgctc
ccggagtacgacaccaaggagaagctgagagagagactgctcaaagccatcctctatgcc
aaagggtttggcatgctctag
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